KEGG   Juglans regia (English walnut): 109001003
Entry
109001003         CDS       T05245                                 
Name
(RefSeq) protein RRC1-like isoform X1
  KO
K12842  U2-associated protein SR140
Organism
jre  Juglans regia (English walnut)
Pathway
jre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109001003
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:jre03041]
    109001003
Spliceosome [BR:jre03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109001003
 Complex B
    109001003
SSDB
Motif
Pfam: Surp RRM_1 CID cwf21 RRM_7 CTK3 Rubredoxin
Other DBs
NCBI-GeneID: 109001003
NCBI-ProteinID: XP_018833652
UniProt: A0A2I4FPU1 A0A833UV48
LinkDB
Position
8:661195..671585
AA seq 982 aa
MSSFSITRKKTPFQKHREEEEARKKRAEDETARLYQEFVESFQGDITPGSKTFVRGGTIN
PNEKLKAVSEGEKSKDGVSVPKKGSRYVPSFIPPPLATKGKESEKKKEDDKPKEKEKGKS
RNIDHFMEELKHEQEMRERRNQERDHWRDGRHNENSAPSTRFDELPDDFDPSGKLPGSFD
DGDPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMN
RADGQAAKDEMQGVVVYEYELKIGWGKSVALPSQALPAPPPGHMAIRSKEGSTVILSGPS
GPPVTSVPSQNSELVLTPNVPDIMVITPNDDHLRHVIDTMALYVLDGGCAFEQAIMERGR
GSHLFNFLFDLGSKEHTYYVWRLYSFVQGDTLQRWRTEPFIMITGSGRWIPPPLPTVKSP
EHEKESGSTFAAGRSRRVELERTLTDAQRDEFEDMLRALTLERSQIKEAMGFALDNADAA
GEIVEVLTESLTLKETPIPTKVARLMLVSDVLHNSSAPVKNASAYRTRFETTLPDIMESF
NDLFRSITGRITAEALKERVLKVLQVWSDWFLFSDAYVNGLRATFLRPGSSGVIPYHSIC
GDAPELEKKNRSEDTGDGAKVNQDTALAMDKGAAMKELMNLPLAELERRCRHNGLCLVGG
REMMVARLLSLEEAEKQRVYEIDDELKYAQSHSSSGRYSHSRREMTVEAEQVGLDGWSRH
GEDDLQSQGEESVPLAPTLPILQPELKAFSKKEKIEPILPASKWAREDDESDDEEKGSAK
GLGLSYSSSGSENAGDDPGKADEMEFAVGTSIPTQPDTGMNEEQRQKLRRLEVALIEYRE
SLEERGIKSLDEIEKKVAIRRQQLQSEYGLLDSKGDSSGNTAARTSSERRDRRNDAQDTS
RKRHRSQSQSESPPWKSLNRDKERENALDRDRERHRDRDRTHDFENERGREWDREKSGSR
ERDDHERDRGRERDRDRRRRPK
NT seq 2949 nt   +upstreamnt  +downstreamnt
atgagttctttctccattacgcggaagaagacgcctttccagaagcacagagaggaagaa
gaggcaaggaaaaagagagcagaagatgaaacggctcgactataccaagagtttgtggaa
tcatttcaaggggatattacgcctgggtcaaagacttttgttcgaggaggaacaataaac
cccaatgagaaactgaaggcagtttctgaaggtgaaaagtccaaagatggggtatctgtt
ccaaagaagggaagtaggtatgttccatctttcataccacctcccttggcaactaaaggg
aaagaatctgaaaagaaaaaggaggatgacaagccaaaggaaaaagaaaaagggaagtct
cggaatatagatcatttcatggaggaactgaagcatgagcaggagatgagggagaggcga
aatcaagagcgtgatcattggcgtgatgggcgccacaatgaaaattctgccccatctact
cgctttgatgaactgcctgatgattttgacccaagtggaaagcttcccggatcatttgat
gacggcgatccgcaaactactaatctctatgttggaaatctctcaccccaggttgatgaa
aattttcttctgcggacttttggaagatttggacccattgctagtgtgaagataatgtgg
cctaggactgaagaggagcgtaggcggcaaagaaattgtggctttgtagctttcatgaat
agagctgatggacaggctgcaaaggatgaaatgcagggagttgttgtttatgaatatgag
ttgaagattggatggggtaagtcagtcgctctaccttcgcaagcgctacctgctcctcca
ccaggacatatggccatcaggagtaaggagggtagcactgtaattttgtctggtccatca
ggtccaccagtcacttctgttccaagtcagaattctgaactggttcttaccccaaatgtt
cccgatataatggtcattacacccaatgacgatcatctccgccatgtaattgacacaatg
gctctatatgttctggatggaggatgtgcctttgaacaagctatcatggagagaggtcgt
gggagtcatctcttcaacttcttgtttgatcttggctcaaaggaacatacttactatgtc
tggcggctctattcctttgttcagggtgatacccttcaaagatggcgaacagagcctttt
atcatgataactggaagcggaagatggattccaccacctctgccgacagtaaaaagccca
gagcacgaaaaggagtctggctccacatttgctgcaggaagaagcaggcgggtggaactg
gaaagaacacttactgatgcacagagggatgagtttgaggatatgctgcgtgctttaaca
ttagagaggagtcagataaaggaagctatggggtttgccctggataatgctgatgcagct
ggagagatagttgaagttctgacggaatctttgacacttaaggaaactcccattccaacc
aaagttgctaggcttatgcttgtttctgatgttcttcacaatagtagtgctcctgtaaag
aatgcatctgcataccgcaccagatttgaaacaactttacctgacattatggaaagtttt
aatgatttgtttcgtagcattactggaaggattaccgctgaggctcttaaggaacgggtg
ctcaaagtgttgcaagtatggtcagactggtttttgttttcggacgcatatgttaatggt
ttacgagctacatttctccgacctgggagctctggtgtcattccatatcattccatatgt
ggtgatgcacctgaactagaaaaaaagaatagatctgaagatacaggtgacggggctaag
gtcaaccaagacactgcattggcaatggacaaaggagcagcaatgaaggagctaatgaat
cttcccctcgctgagctggagagacgttgcagacataatggattgtgtcttgttggtggt
agagaaatgatggttgcacggttgctaagtctggaagaggctgaaaaacaaagggtctat
gaaattgatgatgagttgaaatatgcacagagccattcaagttctggcagatattcccat
agccgtagagaaatgactgttgaagcagagcaagtgggtctggatggatggagtcgtcac
ggggaggatgatttgcagtcacaaggcgaagagtctgttcctttggctccaacccttccc
attctgcagcctgaactaaaagctttctcgaagaaagagaaaattgaacccatcctgccg
gcatctaaatgggctcgagaggatgatgaaagtgatgatgaagaaaaaggtagtgctaag
ggtctggggttgagctactcatcttctggaagtgagaatgctggtgatgatcctggtaag
gctgatgagatggagtttgcagttggtacgagcatcccaacacaacccgacactggaatg
aatgaagagcaaagacaaaagctgagacgtctagaggtagccttgatagaatatcgtgaa
tcccttgaagagcggggaatcaaaagtttggatgaaattgagaagaaggttgctatccgt
cggcaacagttacaatctgaatatgggttattagattctaaaggcgattcttcagggaac
actgcagcaagaacatcttctgaaaggagggacagacggaatgatgcccaagacacttca
agaaagcggcaccgcagccaaagccaaagtgagagcccaccatggaaatccttgaaccga
gacaaggaaagggaaaatgcattagacagggacagggaaaggcacagggatagagatagg
actcatgattttgaaaatgagagagggagggagtgggaccgtgagaagagtggaagcaga
gagagggatgaccatgaaagggatagaggcagagaaagagacagagataggaggagacgg
ccaaagtga

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