Juglans regia (English walnut): 109001080
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Entry
109001080 CDS
T05245
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jre04131
]
109001080
Membrane trafficking [BR:
jre04131
]
Protein recycling
Others
EARP complex
109001080
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
109001080
NCBI-ProteinID:
XP_018833747
UniProt:
A0A2I4FQ35
A0A833XLG9
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Position
5:complement(18367306..18395651)
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AA seq
1138 aa
AA seq
DB search
MQPNLFPFGTVLGNPFLFNGDLSEGFESSRVFFLVPFLLFQGGGMDLSKVGEKILSSVRS
ARSLGLLPSTSDRPEVPARVAAAAAVAHALAGLPPHQRFDLPSSSEGLRSIYGIRPSGQV
VEELEEGFYGEDFDPIRHVLENIPSDENDLAYFEKQAALRLAQLDKVAESLSHHVMEHHE
VMVKGMNLVRELEKDLKIANVICMNGRRHLNSSMNEVSRDLIVNSNSKKKQALLDMLPVL
TELRHAVDMQVALESLVEEGNYCKAFQVLSEYLQILDSFSELSAMQEMSRGVEVWLGKTL
QKLDSLLLGVCQKFKEEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVLSETHSVLKNIVQ
EDQEVMENTRLTYSDLCLRIPESKFRQCLLATLAVLFKLMCSYYEIMGFQLENKGETFTS
LFQDSAGQTSNMRQKEKDICWSSGGVPQVDSDTRNSCNSQEINGSLSESVDGKPGSSPEE
STSTSTSCLVETTKTNVTTSLDSQNTIDEARKDDSTASSSGSPWYQLRKDATAFVSQTLQ
RGRKNLWQLTTSRISVLLSSVAVCATSIHQFLKNYEDLNVFILAGEAFCGVEAVEFRQKL
KIVCENYFVAFHRQNIYALKMVLEKENWQKLPPDTVQVISFPGLLGDGAPIIVPSAGNSG
NARVLPSNKSTSLVDTSSKHGFLHWLESGNPFLQKAAYTSKEGHTSPLNGTICSEFDGNI
SDSSHGDKFSPQKSDVNKINGSDSISEDENEDLLADFIDEDSQLPSRISKPNLPRSYSSH
WKHEEITAQTGSSVCLLRSMDKYARLMQKLEIVNIEFFKGVCQLFGVFFYFVFETFGQQN
PSSSGKSLTDSLNYRLKTALSRITQDCDQWIKYQSSSPTSLNTSYTHADVTHMSPSGANF
GHFPGTSFGLKERCAGADSLSLVAQVLHRSKSHLQLMLLQNNGTIVDDFYVHLVDAVPFL
VEHTHRTTAKLLLNMNGYVDRIANAKWEVKELGLEHNGYVDLLLGEFKHYKTRLAHGGIR
KEVQDHLLEYGVEIVAETLIEGLSRVKRCTDEGRALMSLDLQVLINGLQHFVSVNVRPQL
QMVETFIKAYYLPETEYVHWARGHPEYSKSQIVGLINLVATMKGWKRKNRLDVLEKIE
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgaatctgttcccgttcggtactgttttgggaaatccgttcttgttcaatggc
gatttgagcgaggggttcgagagctctagggttttcttcttggtcccgttcttgttgttc
caaggaggcgggatggatttgtccaaggtcggtgagaagattctcagctcggttaggtcc
gccagatcgcttggacttcttccttctacttctgatcgccccgaggttcctgcccgtgtt
gcagctgcagcagctgttgctcatgctcttgcaggattgcctccgcatcagaggttcgat
ctgccatcaagttcagaagggctgagatcgatatatggaatcagaccttctggtcaagtt
gtggaggagttagaggaaggcttctatggagaggacttcgatccaattaggcatgtttta
gaaaatattccatctgacgaaaatgacctggcgtattttgagaaacaggccgctcttaga
ttagcacagcttgataaggtggcagaaagtttatctcatcatgttatggagcatcatgaa
gtaatggtaaaggggatgaatcttgtccgggagttggaaaaagacttgaagattgcaaat
gtcatctgcatgaatggaagaaggcacctaaattcatctatgaatgaagtttcaagggac
ctgattgtaaattctaattccaaaaagaaacaagctcttctggacatgcttccagtttta
actgagcttcggcatgcagtggacatgcaagtggcactcgaatctcttgttgaggaagga
aattactgcaaggcgttccaagttctatctgagtatttgcaaatcttagatagtttctca
gaactttctgcaatgcaagagatgagtcgtggtgtggaggtatggctgggaaaaactctt
caaaaactagattcacttttacttggggtttgccagaagtttaaagaggagggctatttg
actgtggttgatgcttatgcactaattggggatgtatctggtcttgctgaaaagatacag
agcttctttatgcaggaggttctgtcagaaacacactctgtattgaagaatattgtgcaa
gaggatcaggaagtcatggaaaatactagacttacctacagtgatctatgccttcggata
ccagaatctaagtttaggcagtgtttgttagcaacactagctgttctattcaagttgatg
tgttcatattatgagattatgggctttcagctggagaataagggtgaaacatttacatct
ttgtttcaggattcagcaggtcaaacttcaaatatgagacagaaggaaaaggacatttgt
tggagttcaggaggggttccacaagttgattcggatacaagaaattcttgcaattctcaa
gaaataaatggctctctctcagaatctgttgatggaaagcctggttcatctccagaagaa
tctacaagcaccagcaccagctgtttagttgagactaccaaaactaacgttacgactagt
ttagactctcaaaatacaattgatgaggctaggaaggatgatagtaccgcatctagtagt
ggatccccatggtatcaattgcggaaagatgctacagcatttgtttcacaaacccttcag
agaggacgcaagaatctttggcaactcacaactagtcgtatatctgtattgctttcatct
gttgctgtttgcgctacaagcattcaccaattcttgaaaaattatgaagatctgaatgtc
ttcatcttagctggggaagccttctgtggagttgaagcggttgagttcagacagaagttg
aagattgtttgtgaaaactattttgtagcatttcatcggcagaatatttacgcacttaaa
atggttttggaaaaggaaaattggcaaaaattgccaccagatacggtacaagtaataagt
tttcctgggcttcttggtgatggagcacccataattgttccatctgctgggaactctggt
aatgccagggtgcttccttccaataaatcaacaagcttggttgatactagttcgaagcat
gggtttttacattggcttgaaagtggaaatccatttctgcaaaaagcagcatacacttcc
aaagaaggccatacttccccacttaatgggactatctgcagtgaatttgatggaaatata
agtgacagttctcatggtgataagttctcaccacaaaagagtgatgtaaataaaatcaat
ggctctgattctatttccgaggatgaaaacgaagatcttcttgcagactttattgatgag
gacagtcaacttccaagtcgaatttcaaagcccaatcttccaagaagctactcttcacat
tggaaacatgaagagataacagcccaaacaggatcctctgtttgtcttctaaggtccatg
gataaatatgcaaggcttatgcagaaattagaaatcgtgaatattgagtttttcaaggga
gtatgccagctgtttggggtttttttctattttgtatttgaaacatttggtcagcaaaac
cccagctcaagtggaaaaagcttaactgactctcttaattatcggctaaagacagcctta
tccagaataacacaagattgtgatcagtggataaaataccagtcctcttcacccacctcc
ttgaacacatcatatacgcatgcggatgttacacatatgagtccatccggtgcaaatttt
gggcactttccagggacatcttttggtctcaaggaaagatgtgcaggtgctgacagttta
tctcttgttgctcaagtattgcatagatctaaatctcatctccaattgatgcttctgcaa
aataatggaactatagttgacgatttttatgtccatctggtggatgctgtgccgtttctt
gtagagcacacgcataggacaactgcaaaactacttctcaacatgaatgggtatgttgat
cggattgccaatgctaaatgggaagtgaaagagcttggtctagagcataatgggtatgtt
gacttgttgctgggggaatttaagcactataaaaccaggcttgctcatgggggaatccgc
aaagaggttcaagaccacctcttagagtatggagttgagatcgttgctgaaactctgatt
gaaggtctatctcgagttaagcggtgtacagatgaaggacgagccctcatgtcattggat
cttcaggttttaattaatggtttacagcattttgtgtctgtaaacgtgagaccccaatta
cagatggttgagaccttcattaaggcttactacctacctgaaactgaatatgtacactgg
gcacggggtcacccagaatacagtaaaagtcaaatcgttgggctgatcaaccttgttgct
accatgaaaggctggaagagaaaaaacaggttggatgtactggagaagatcgagtga
DBGET
integrated database retrieval system
