Juglans regia (English walnut): 109001121
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Entry
109001121 CDS
T05245
Name
(RefSeq) RNA-binding protein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
jre
Juglans regia (English walnut)
Pathway
jre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109001121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
109001121
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109001121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
109001121
NCBI-ProteinID:
XP_018833811
UniProt:
A0A2I4FQ88
A0A833UI29
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All DBs
Position
8:5400830..5406341
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AA seq
329 aa
AA seq
DB search
MDDEAKLFVGGISRVTSEDILRKHFDKYGTVLGSSIAKDRITKNSRGFGFVWFSDSSAAH
KALQDSHVILGKTVEVKKAIPRSEQQQHQNQQQNGGSSKSSSIDNGDNQYRTKKIFVGGL
SASLTEEEFKKYFERFGSVTDVVVMHDSTTHRPRGFGFITFDSAECVVNVMKNSFHELNG
RLVEVKRAVPKEVSNGSESGFNTRMEGGIGPSCSYSPFRPGYWILPSYAPFPGFGGGGGG
SLYGASIYGGWYPIGGSGSIGSGISPLAPRSPWYGTTVIGAGALPLPQSRASVYTAYSGG
AGVMGMAAGGYSGNVGQRELEAESGSLWQ
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaagccaagctcttcgtcggaggaatttctcgggtgaccagtgaagacatt
ttgaggaaacatttcgacaaatacggcacagtattgggctcatccattgcgaaggaccgg
atcaccaagaattctagagggtttggattcgtctggttctccgactcatctgctgctcat
aaagcccttcaagactcgcatgttattctgggaaaaacggtagaagtcaaaaaagcaata
cccaggagtgaacaacagcagcatcaaaaccagcaacagaatggaggatcaagtaagagt
agtagtattgacaatggcgacaatcaatataggactaaaaagattttcgtaggaggttta
tcagctagtctaaccgaggaagagtttaagaaatactttgagaggtttggtagtgtaaca
gatgtagtggtgatgcatgacagcacaacccatcggcctaggggttttggctttatcaca
tttgattcagcggagtgcgtggtgaatgtgatgaagaatagcttccatgagctaaatggt
aggcttgtggaggttaagagggctgtgccaaaagaggtaagtaatggtagtgagagtggt
tttaacacaagaatggagggtggaatagggccttcttgcagttattctccttttagacct
ggatattggattctcccaagttatgcaccttttcctgggtttggtggtggtggaggaggc
tctctttatggagcaagtatttatggcggttggtaccctattggaggatctggtagcatt
ggttctggtatttctccacttgctccaagaagtccttggtatggcaccacggtgattggt
gctggggcattaccgttgcctcagagcagggcttctgtttatactgcatacagtggtggg
gctggagttatgggtatggctgctggtgggtacagtgggaatgttggacaaagagaatta
gaagctgaatcgggctctttgtggcaatga
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