KEGG   Juglans regia (English walnut): 109001528
Entry
109001528         CDS       T05245                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
jre  Juglans regia (English walnut)
Pathway
jre03018  RNA degradation
jre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109001528
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109001528
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jre03019]
    109001528
   03041 Spliceosome [BR:jre03041]
    109001528
Messenger RNA biogenesis [BR:jre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     109001528
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     109001528
Spliceosome [BR:jre03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    109001528
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 109001528
NCBI-ProteinID: XP_018834402
UniProt: A0A2I4FRX2 A0A833X7P0
LinkDB
Position
14:403495..407662
AA seq 100 aa
MSGSRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEFTRDPDDPLK
TTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA
NT seq 303 nt   +upstreamnt  +downstreamnt
atgtcaggaagcaggaaggaaacggttttggacttggcaaagtttgtggacaaaggtgtc
caagtcaagctcactggtggtagacaagtgaccgggactctaaaaggatatgaccaatta
ctaaaccttgttctggacgaagccatagagtttacgagagatcctgatgatccactgaag
actactgatcagaccaggcgtctaggccttatagtttgcaggggaaccgctgtaatgctt
gtgtcccccacagatggtactgatgagattgccaatcctttcgtccagccagatggggcc
tag

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