Juglans regia (English walnut): 109001537
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Entry
109001537 CDS
T05245
Name
(RefSeq) uncharacterized protein LOC109001537 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
jre
Juglans regia (English walnut)
Pathway
jre03030
DNA replication
jre03410
Base excision repair
jre03420
Nucleotide excision repair
jre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109001537
03410 Base excision repair
109001537
03420 Nucleotide excision repair
109001537
03430 Mismatch repair
109001537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jre03032
]
109001537
03036 Chromosome and associated proteins [BR:
jre03036
]
109001537
03400 DNA repair and recombination proteins [BR:
jre03400
]
109001537
DNA replication proteins [BR:
jre03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109001537
DNA Replication Termination Factors
ELG1-RFC complex
109001537
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
109001537
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109001537
Check point factors
HRAD17(Rad24)-RFC complex
109001537
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
HSA
RuvB_N
AAA_22
AAA_lid_RFC1
COMPASS-Shg1
Motif
Other DBs
NCBI-GeneID:
109001537
NCBI-ProteinID:
XP_018834418
UniProt:
A0A2I4FS03
LinkDB
All DBs
Position
12:complement(9093992..9103107)
Genome browser
AA seq
761 aa
AA seq
DB search
MPIQSSIPRSSSDPSLSTTICSHSGLPSNSNHSPSSTPPSKSKYSLRSPLLERIINGIKS
QSLVASRRSYLKEKDLEVHNRRIAAINVDDAYSNSTPYYKGVYYDSLITKTPKLTSGISS
GRKSDSDSVATSTSSSLSTFIFRIRDLSSNCFSVKIKRDETSKPATYATMKSAGRTPFFP
SSSPSASSPRATVTVLKEKSTIAEERKETTVGDVHALLAKEKPLRERVAEPAAVTTVVMQ
PSKANPMANKYSPFLTQTPSASAAPRTKTRVLKEMSEGRNEIIGKGDANDLLVEKKLLRE
SAEKPAPKIPTGLVLQPSKSKDRIINEKDGNKKMRNNREFVWANKYQPKALDDFICNREK
AMELLALIREGGCGHIIFEGPPGVGKRTMIWAMLREAFGPDRVQVRDECKAFNLKGEMLG
KIQVNVKQSPRHIEVNLSELKGYEKHVVVELIKETQNMISIKGLPCDSDNCRAIILYEAE
KLSTDALLYIKWLLERYKGCNKVFFCCSDLSKLQPIKTICTVVQLVPPSRKEIVEVLEFI
AKQEGIELPHRLAEKFAEKSKNNLRQAIRSFEASWLVNYPFQEDLEILTGWEDDIANIAK
NIVEEQSPKQLYMIRGMLQNLIEHDVSPDSMFKFLVKELKKHAQEELKQQIDKLYEEYSR
VDENLFESQKLAFANNKSEETGKGAHEPMRRNIVQQFLRIEALSMYYCSIWRYRNDKKHH
DYLLLQMLITSRNFRGEFATQRLNLINEAVRPDHTHKLQFL
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgccgatccaatcatcaatcccacgatcttcttctgatccatccctctccacaacaatc
tgctctcactctggcttgcctagtaattccaaccactcaccatcttcaactcctccatca
aagtcaaaatactctctgcgctccccactactagaaaggattattaatggcattaaaagc
caatccttggtggcctccaggcgttcgtatttgaaagagaaggatcttgaggttcacaac
agaagaattgccgccattaatgtcgacgacgcttactccaattccactccatattacaaa
ggagtgtattatgattctctaattaccaaaacgccaaaattgacttctggaatcagttct
ggacgcaaaagtgactcagacagtgttgctacctctacctctagctctctctccaccttc
atctttagaattcgagatctgagttctaattgctttagtgttaaaattaagagagatgag
accagcaagcctgcaacctatgccacgatgaaatctgcaggtcgcactcctttcttccct
tcttcatcaccatcagcatcgtcacctagggcgactgtgacggtgttgaaggagaagagt
acgattgctgaagaaaggaaggagacgaccgtcggcgatgtccatgctttgttagctaag
gagaagccattgagggagagagtagcagaacccgcagccgtaacaactgtagtaatgcag
ccatccaaagccaatccaatggcaaacaagtactctcctttcttgactcagacaccatca
gcatcggcagcaccaaggacaaagacgagggttttgaaggagatgagtgaaggaaggaac
gaaatcatcggtaaaggcgatgctaatgatttgttagttgaaaagaagctcttgagagag
agtgcggaaaaacccgcacccaaaataccaaccggcctagtattgcagccatccaaatca
aaagaccgaatcataaatgagaaagatggcaacaaaaagatgaggaataaccgcgagttt
gtatgggcaaacaagtaccaacccaaggccttggacgacttcatttgcaatcgagaaaaa
gccatggagctactagctttgatcagagagggaggatgtggccatattatatttgagggg
ccaccgggcgtggggaagagaaccatgatatgggctatgcttcgagaggcttttggacct
gacagagtacaggtgagggacgaatgcaaggcatttaacttgaagggtgaaatgttgggt
aagatccaagtaaatgtaaagcaatctccccggcacattgaagtcaatctctctgaacta
aagggctatgagaagcatgtcgttgttgaacttatcaaggaaacacaaaatatgatttct
atcaaaggtttgccttgtgactctgacaattgccgagcaattattttatacgaggcagaa
aagctatctacagatgccctactatacataaagtggctattggaacggtataaaggatgt
aataaggttttcttctgttgctctgatctctcaaaacttcaacccatcaaaacaatttgc
acagttgttcagctggtaccaccttcacgtaaagagattgttgaagttttggagttcata
gctaaacaagaaggcatagaattgccacatcgattggctgaaaaatttgcagagaagtcg
aaaaataatcttcgtcaagccattcgatcatttgaggcctcttggttggtcaattatccc
tttcaagaagatctagaaattttgactggatgggaagatgacattgcaaatattgctaag
aatatagtagaagagcaaagtccaaaacagttatatatgattcgtgggatgcttcaaaat
ctcatagagcatgatgtatcccccgactctatgttcaagtttctggtaaaagagctaaag
aagcatgcacaagaggaattaaaacaacaaattgataaactgtatgaggaatacagtagg
gttgatgaaaatttatttgaaagtcagaaattggcctttgcaaacaataaatccgaggaa
actggcaaaggagctcatgaaccaatgagaaggaatattgttcaacaatttctgaggatc
gaagcactctcaatgtactactgttcaatatggcgttataggaatgacaagaagcatcat
gattatctcctactacagatgctgattacatctcggaatttcagaggggaatttgcaacc
cagagattaaatttgatcaacgaggcggtgaggccggatcatacccataaattgcagttt
ttatga
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