Juglans regia (English walnut): 109002048
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Entry
109002048 CDS
T05245
Name
(RefSeq) ATP-dependent helicase BRM-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109002048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
109002048
03036 Chromosome and associated proteins [BR:
jre03036
]
109002048
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109002048
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
109002048
Chromatin remodeling factors
BAF complex
109002048
PBAF complex
109002048
GBAF(ncBAF) complex
109002048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
QLQ
DEAD
Bromodomain
HDA2-3
AAA_14
DUF6373
Motif
Other DBs
NCBI-GeneID:
109002048
NCBI-ProteinID:
XP_035539574
UniProt:
A0A6P9DWE2
LinkDB
All DBs
Position
12:5070034..5091237
Genome browser
AA seq
2252 aa
AA seq
DB search
MQSGGGGGGGPSRMGPAGRAASTSSAASPSSSSSAVSTPHLGFDSMQQQIGSRQSLQQQL
HRKTEGNEALLAYRASLQGVMAGNNFNSSPGSMQLPQQSRMTQQHGSSHEGPHRGQAVEP
QVPNPVHQAYLQYAFQAAQQKSALALQSQQHAKMGILGPPSGKDQGMRMGNPKMQDLISM
QAHTQAQVPTSKNSSEQFGRGEKQMDQGQQSASEQGTEQKPSTQATSIGHLIPGNMVRPL
QASQAQQNIQNMANNQLTMSAQLQAMHSWALERNIDLSLPANANLMAQLIPVLQSRMATQ
QKPNESNMGAQSTSVPVSKQQVTSPPVANESSPHANSSSDLSGQSGSAKARQTVSPSPFG
STPNAGIVKHANNTALQQFSTHGRENQVPSRQPAVIGNGMPPMHPPQSSPNMSQGVDHSS
VKNSISSPEALQMQYLRQSNRTSPQAVVPTNDGASNNNIVSQGGSTIQTPQQRFGFTKQQ
LHVLKAQILAFRRLKKGDPGLPQELLRAIAPPPLDLQLQQKLPPTGGNNQDKSDGNIVAD
YPRHMESNEKTTHAVTSINGQSFLTEEAFVGEEKATVTTAHMQGVPVVMKDPPPAVSAGK
DEQQSTVHSVKSDQDVEHGIHRPPVRSDFPADRGKSIAPQGAISDAAQVKKPAQASTAPQ
PKDIGSTRKYHGPLFDFPFFTRKHDSFGSAMMVNNNNHLTLAYDVKDLLFEEGVEVLTKK
RSENLRKIGGLLAVNLERKRIRPDLVLRLQIEEKKLRLLDLQARLRDEIDQQQQEIMAMP
DRPYRKFVRLCERQRMELTRQVQASQKAVREKQLKSTFQWRKKLLETHWAIRDARTARNR
GVAKYHERMLREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGEAAERYAVLSS
FLTQTEEYLHKLGNKITAAKNQQEVEEAANAAAVAARLQGLSEEEVRAAAACAGEEVMIR
NQFMEMNAPKDSSSVSKYYTLAHAVNERVVRQPSMLRTGTLRDYQLVGLQWMLSLYNNKL
NGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHSWLPSVSCIY
YVGGKDQRSKLFSQEVSALKFNILVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRESV
LARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPFQKEGPT
QNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIY
DWIKSTGTLHVDPEDEKRRVQKNPNYQAKVYRTLNNRCMELRKACNHPLLNYPYFNDFSK
DFLVRSCGKLWIMDRILMKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSL
EDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHR
IGQTREVKVIYMEAVVDKISSHQKEDEVRNGGTVDMEDDLAGKDRYMGSIESLIRNNIQQ
YKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQETLHDVPSLQEVNRMIARSKE
EVELFDQMDEELDWAEDMTRYDEVPKWLRASTREVNSTVAALSKRPSKNTLLASNVGMES
SEVGSDSSPKTERKRGRPKGRKNPNYKELDDENGEYSEASSDERNGYSIHEEEGEIGEFE
EDEFGGAVEGPLINKDQSEEEGPVCGGEFEYPQASESTKNNPMLEEAGSMGSSSDSQRLT
QMVSPSVSSQKFGSLSALEARPGSLSKRLPDELEEGEIAVSGDSHMDHQQSGSYDRDDGE
EEQVLQPKIKRKRSLRVRPRHTMERPEEKSGNEIQSFEHGDSSLLPLQVENKYQALLRTD
PGTKPYGESSASKHDQNDSSSKIRRNLPSRRIANASKLHASPKSSRLNCMSVPAEDAAEQ
SRESWDAKVMDSRGTKTFGTKMPDSIQRRCKSVISKLQRKIGKEGPQIIPLLTDLWKRIE
NAGYMGGSGNNILDLRKIDQRIDRLEYSGVMELVLDVQFMLKSAMHFYGFSHEVRSEARK
VHDLFFDILKIAFPDTDFREARNALSFSGTFSTTSAPSPRQATVGPSKRQKLVNEVEPDT
CLPQKVLQRGKISSGDDSRIRSHIPQKDSRLGAGIGSSREQCQQDDPPLLTHPGELVICK
KKRKDREKSVVKPRTGSVGPVSPPSMGRGMRSPGPSSVPKDTRQTQQTTYPQGWTNQPGT
AQPTNGDGGTVGWANPVKRLRTDSGKRRPSHV
NT seq
6759 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccggtggtggaggtggcggtgggcccagccgaatgggcccggcagggcgggcg
gcatcaacttcatctgctgcgtcaccgtcctcgtcctcctcggccgtgtccacaccgcac
ttggggttcgattcgatgcagcagcagatagggtccaggcagtcattacaacaacagttg
catagaaaaactgaaggcaacgaagcccttctagcatatcgagctagtctccaaggagtt
atggcagggaacaatttcaattcatctcctggttctatgcagctgcctcaacagtctagg
atgacacaacagcatggttcctctcatgagggcccacataggggtcaagctgttgagcca
caagtaccaaatccagtccatcaagcttatcttcagtatgctttccaggctgctcagcaa
aagtcggcgctggccttgcagtcacagcagcatgctaagatgggaatattgggccctcca
tctgggaaggaccagggcatgcgaatggggaatcctaaaatgcaggatctcatttccatg
caggcgcatactcaggctcaggtgccgacatcaaaaaactcatctgaacaatttggtcgt
ggtgaaaagcagatggatcaaggacaacaatcagcctccgagcaggggactgagcaaaag
ccttcaacccaggcaacaagtattgggcatttaatacccggaaatatggtgaggcctttg
caagcatcacaagctcagcagaatatccaaaacatggcaaacaaccaactcacgatgtct
gcccagttgcaggcaatgcattcgtgggcacttgaacgcaatattgatctctcactgcct
gcaaatgccaacttgatggcgcagctcattccagtgttacaatctaggatggctacacag
caaaaaccaaatgaaagtaacatgggtgcacagtcaacatctgttccagtgtcaaaacag
caggtcacctctccaccagttgccaatgagagttctccccatgctaattcatcaagtgat
ttatctggacagtctggatctgcaaaggctaggcagactgtttctcccagcccttttggt
tcaacgccaaatgctggcattgtcaaacatgctaacaacactgcattgcagcagttttct
actcatggcagagagaatcaggtcccttctagacagcctgctgtgattggtaatggaatg
cctccaatgcatcccccacagtcatctcccaacatgagccagggcgttgatcattctagt
gtgaaaaattcaataagtagccctgaagcactgcagatgcagtacctcaggcaatcaaat
cgaacttctccacaagctgtagttcctactaatgatggggcctctaacaacaatatcgtt
tcacaaggtgggtcgactattcagacaccgcagcagcgctttggattcaccaagcagcaa
ttgcacgttcttaaagcacaaatcctagcatttagacggctaaagaaaggagaccctggt
ctcccccaagaacttcttcgggcgattgctccaccaccccttgatcttcagctgcagcag
aaactgccccccacgggaggaaataatcaggataaatctgatgggaatattgtggctgac
tatccgaggcatatggagtccaatgagaaaactactcatgctgtcacgtcaattaatgga
caaagtttcctaacagaggaagcttttgtgggagaagagaaagcaaccgtcaccacagct
catatgcaaggtgtgccagttgtaatgaaggatcctccaccagcagtatctgctggaaaa
gatgagcagcaatccactgtacattctgttaagtcagaccaggatgttgaacatggtatt
cataggcctccagttagaagtgattttccagcagataggggaaagtctattgcaccacag
ggagctatatctgatgcagcgcaagttaagaaacctgcacaagcgagcactgctcctcaa
ccaaaagacattggatccaccagaaagtatcatggacccctatttgatttcccctttttc
accaggaaacatgactcctttggatcggccatgatggttaataacaataatcatctaaca
ttggcatatgacgtcaaagaccttctctttgaggaaggcgtggaagtgcttaccaagaaa
agatccgaaaatttaagaaagattggtggtctactggcagtaaacttagagaggaaaagg
ataaggccagatcttgtcttgaggttgcaaattgaagagaaaaagcttcgacttttagat
ctacaggcccggttaagggatgaaattgatcaacagcaacaggagataatggcaatgcct
gacaggccatataggaagtttgtccgactgtgtgagcgtcagcgtatggaactcaccaga
caagtacaggcctctcagaaagctgtgagagagaagcaactgaaatccaccttccagtgg
cgtaagaagcttcttgagactcactgggccatccgtgatgcacggactgcacgtaatagg
ggagttgccaaatatcatgagagaatgttgagggagttttcaaaaagaaaggatgatgat
aggaataagaggatggaggcattaaagaataatgatgtcgaaagatatagggagatgttg
ctggagcagcagacaagcattccaggtgaggccgcagagagatatgctgttctctcatcg
ttcttgactcagacagaagaatatctacataaactgggaaataaaataactgctgccaaa
aatcaacaggaggtggaggaggcagcaaatgccgctgcagtagctgcacgattgcagggt
ctctccgaagaagaggttagggcagctgcagcatgtgctggggaggaagtaatgataaga
aatcagttcatggaaatgaatgcacctaaggatagttcatctgttagcaagtactatacc
cttgcccatgctgtgaatgaaagggtcgtgaggcaaccctcaatgctacgtactggaacc
ttaagagactatcaacttgttgggttgcaatggatgctatctttatataacaataaatta
aatggaatcttggcagatgagatgggtcttgggaagactgtacaggtaatggcattgata
gcttacttgatggagttcaaagggaactatggcccacatcttataatagttccaaatgct
gttctggtaaactggaagagcgagctccatagttggctgccatctgtgtcatgcatttat
tatgttggtgggaaggatcaacgatcaaaattattttctcaagaggtttctgctctgaaa
tttaatatccttgtgacaacatatgagttcataatgtatgatcgttcaaaactttcaaaa
attgactggaagtatatcataattgatgaagcacaacggatgaaggatagggagtcggtt
ttagcacgtgatcttgatagatatcgctgccagaggcgcctgctactgactgggacacca
ttacagaatgatttgaaggaactctggtcactcttaaatctacttcttccagaagtcttt
gataatcggaaagcatttcatgattggttctcaaaaccctttcagaaggaaggtcctacg
cagaatgcagaggatgactggctggagactgaaaaaaaggttatcatcatccaccgactt
catcaaattctagagccctttatgcttaggcgtcgtgttgaagatgtggaaggctcactt
ccgcctaaggtttccatagttttaagatgcaggatgtcagctattcagagtgccatttat
gattggatcaaatccactggtactcttcacgttgatcctgaagatgaaaagcgcagggtt
caaaaaaacccaaattaccaggctaaggtgtatagaactctaaataacagatgtatggag
cttcgtaaagcctgcaatcatcctttgctcaattacccatatttcaatgacttctctaag
gattttcttgtaagatcatgtggaaaattgtggatcatggataggattcttatgaaactt
cagagaacagggcatcgagtactgctctttagtaccatgactaaactccttgatatattg
gaggaatacttgcaatggcgacggcttgtctacagacgaattgatggaacaactagttta
gaagatcgtgaatctgcgattgtggactttaatagcccagactctgactgcttcattttc
ctgcttagtattcgtgcagctggtagaggtcttaatcttcaatctgctgacacagttatc
atatatgatcctgatccaaaccctaaaaatgaggaacaggcagttgctagagcccaccgt
attggacagactagagaagtcaaagtgatttatatggaagcagttgtcgacaaaatctct
agccatcaaaaggaagacgaagtaagaaatggaggtactgttgatatggaggatgacctt
gctggtaaggatcgttatatggggtctattgagagcctgataagaaacaacattcaacaa
tataaaattgatatggctgatgaggttatcaatgctgggcgctttgaccaaagaacaaca
catgaagagagacgcctgacgctagagacattattgcatgatgaggagaggtatcaagaa
actctccatgatgttccctcactgcaagaggtcaatcgcatgattgccaggagcaaagag
gaagtagaattgtttgatcaaatggatgaggaactagattgggctgaagacatgacacgg
tatgacgaggtacctaagtggcttcgagcaagtactcgagaagtaaattccactgttgca
gctctttcaaaaaggccatcaaaaaacactttattggctagtaatgttggcatggaatct
agtgaagtgggttctgattcatctccaaaaactgagaggaaaaggggacggcccaaagga
agaaagaatcctaattacaaggaattggatgatgaaaatggggaatactctgaagcaagt
tcagatgagagaaatggatactctatacatgaagaagagggagaaattggagagtttgaa
gaggatgaatttggtggtgctgttgagggaccactaattaataaagaccaatcagaagag
gagggtccagtttgtggtggtgagtttgagtatccccaggcttcagaaagcacaaaaaac
aaccctatgctggaagaagcaggttccatgggatcatcgtcagacagtcaaagattgaca
caaatggtttcaccttccgtttcttcccagaaatttggttccctgtctgctttagaggct
aggccaggttctctctcaaaaaggctgccagatgaactagaggaaggggaaattgcagtg
tctggagattctcacatggatcaccaacaatctggaagttatgaccgggatgacggtgag
gaagagcaggttttgcagcccaaaataaaacgaaaacgcagtcttcgggtccgtccccgt
catacaatggaaaggccagaggagaagtctggcaatgaaatacaatctttcgagcatgga
gattcatctctgttgccattgcaagtggaaaataagtatcaagcgctgttaagaactgac
cctggaacaaaaccgtatggagagtccagtgcttctaagcatgatcaaaatgactcatcc
tcaaaaattaggcgaaatttgccatcaaggagaatcgctaatgcatcgaaattgcatgct
tcgccaaaatctagcagattaaattgtatgtctgttcctgcagaagatgctgccgaacag
tcaagagaaagttgggatgctaaagttatggattcaagggggacaaaaacatttggcact
aagatgcccgacagcatccagagaaggtgcaagagtgtgattagcaagctccaaaggaaa
attggtaaggaaggtcctcaaattatacctttgctaactgatttgtggaagaggattgag
aacgctgggtacatgggtggatcgggaaataatattttggatttgcgaaagatcgatcag
cgtattgacagattggagtatagtggagtgatggagcttgtgttggatgtacagttcatg
ttgaaaagtgcaatgcatttttatggcttctcacatgaggtgagatctgaagcaaggaaa
gtgcatgatctcttttttgatatcttgaagattgcatttcccgacacagattttcgagaa
gccagaaatgcgctctccttttcgggtacattttctacaacttctgctccttccccaaga
caagctactgttggcccaagcaagcgacagaagttggtaaatgaggtggaacctgacacg
tgccttccacagaaggtactgcaacgtgggaaaatatccagcggggatgactcaagaatc
agaagccatattcctcagaaggattcaaggcttggggctggaattggcagtagtcgggag
caatgtcagcaggatgatcctccacttcttactcatccaggggagctggtaatctgtaag
aagaagagaaaagaccgggagaaatcagtggtgaagcctagaactggatcagttggccct
gtttcaccacctagcatgggtcgtggtatgagaagtccaggtccaagttcagtgcccaag
gacacgagacagacccaacaaaccacctatccgcaaggatggaccaatcagcctggtacc
gctcaaccgacgaatggggatggagggactgttggttgggcaaatcctgtaaagcggttg
aggacagattctgggaaaagaaggccgagccatgtatga
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integrated database retrieval system
