Juglans regia (English walnut): 109002048
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Entry
109002048 CDS
T05245
Name
(RefSeq) ATP-dependent helicase BRM-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109002048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
109002048
03036 Chromosome and associated proteins [BR:
jre03036
]
109002048
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109002048
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
109002048
Chromatin remodeling factors
BAF complex
109002048
PBAF complex
109002048
GBAF(ncBAF) complex
109002048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
QLQ
DEAD
Bromodomain
HDA2-3
AAA_14
DUF6373
Motif
Other DBs
NCBI-GeneID:
109002048
NCBI-ProteinID:
XP_035539574
UniProt:
A0A6P9DWE2
LinkDB
All DBs
Position
12:5070034..5091237
Genome browser
AA seq
2252 aa
AA seq
DB search
MQSGGGGGGGPSRMGPAGRAASTSSAASPSSSSSAVSTPHLGFDSMQQQIGSRQSLQQQL
HRKTEGNEALLAYRASLQGVMAGNNFNSSPGSMQLPQQSRMTQQHGSSHEGPHRGQAVEP
QVPNPVHQAYLQYAFQAAQQKSALALQSQQHAKMGILGPPSGKDQGMRMGNPKMQDLISM
QAHTQAQVPTSKNSSEQFGRGEKQMDQGQQSASEQGTEQKPSTQATSIGHLIPGNMVRPL
QASQAQQNIQNMANNQLTMSAQLQAMHSWALERNIDLSLPANANLMAQLIPVLQSRMATQ
QKPNESNMGAQSTSVPVSKQQVTSPPVANESSPHANSSSDLSGQSGSAKARQTVSPSPFG
STPNAGIVKHANNTALQQFSTHGRENQVPSRQPAVIGNGMPPMHPPQSSPNMSQGVDHSS
VKNSISSPEALQMQYLRQSNRTSPQAVVPTNDGASNNNIVSQGGSTIQTPQQRFGFTKQQ
LHVLKAQILAFRRLKKGDPGLPQELLRAIAPPPLDLQLQQKLPPTGGNNQDKSDGNIVAD
YPRHMESNEKTTHAVTSINGQSFLTEEAFVGEEKATVTTAHMQGVPVVMKDPPPAVSAGK
DEQQSTVHSVKSDQDVEHGIHRPPVRSDFPADRGKSIAPQGAISDAAQVKKPAQASTAPQ
PKDIGSTRKYHGPLFDFPFFTRKHDSFGSAMMVNNNNHLTLAYDVKDLLFEEGVEVLTKK
RSENLRKIGGLLAVNLERKRIRPDLVLRLQIEEKKLRLLDLQARLRDEIDQQQQEIMAMP
DRPYRKFVRLCERQRMELTRQVQASQKAVREKQLKSTFQWRKKLLETHWAIRDARTARNR
GVAKYHERMLREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGEAAERYAVLSS
FLTQTEEYLHKLGNKITAAKNQQEVEEAANAAAVAARLQGLSEEEVRAAAACAGEEVMIR
NQFMEMNAPKDSSSVSKYYTLAHAVNERVVRQPSMLRTGTLRDYQLVGLQWMLSLYNNKL
NGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHSWLPSVSCIY
YVGGKDQRSKLFSQEVSALKFNILVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRESV
LARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPFQKEGPT
QNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIY
DWIKSTGTLHVDPEDEKRRVQKNPNYQAKVYRTLNNRCMELRKACNHPLLNYPYFNDFSK
DFLVRSCGKLWIMDRILMKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSL
EDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHR
IGQTREVKVIYMEAVVDKISSHQKEDEVRNGGTVDMEDDLAGKDRYMGSIESLIRNNIQQ
YKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQETLHDVPSLQEVNRMIARSKE
EVELFDQMDEELDWAEDMTRYDEVPKWLRASTREVNSTVAALSKRPSKNTLLASNVGMES
SEVGSDSSPKTERKRGRPKGRKNPNYKELDDENGEYSEASSDERNGYSIHEEEGEIGEFE
EDEFGGAVEGPLINKDQSEEEGPVCGGEFEYPQASESTKNNPMLEEAGSMGSSSDSQRLT
QMVSPSVSSQKFGSLSALEARPGSLSKRLPDELEEGEIAVSGDSHMDHQQSGSYDRDDGE
EEQVLQPKIKRKRSLRVRPRHTMERPEEKSGNEIQSFEHGDSSLLPLQVENKYQALLRTD
PGTKPYGESSASKHDQNDSSSKIRRNLPSRRIANASKLHASPKSSRLNCMSVPAEDAAEQ
SRESWDAKVMDSRGTKTFGTKMPDSIQRRCKSVISKLQRKIGKEGPQIIPLLTDLWKRIE
NAGYMGGSGNNILDLRKIDQRIDRLEYSGVMELVLDVQFMLKSAMHFYGFSHEVRSEARK
VHDLFFDILKIAFPDTDFREARNALSFSGTFSTTSAPSPRQATVGPSKRQKLVNEVEPDT
CLPQKVLQRGKISSGDDSRIRSHIPQKDSRLGAGIGSSREQCQQDDPPLLTHPGELVICK
KKRKDREKSVVKPRTGSVGPVSPPSMGRGMRSPGPSSVPKDTRQTQQTTYPQGWTNQPGT
AQPTNGDGGTVGWANPVKRLRTDSGKRRPSHV
NT seq
6759 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccggtggtggaggtggcggtgggcccagccgaatgggcccggcagggcgggcg
gcatcaacttcatctgctgcgtcaccgtcctcgtcctcctcggccgtgtccacaccgcac
ttggggttcgattcgatgcagcagcagatagggtccaggcagtcattacaacaacagttg
catagaaaaactgaaggcaacgaagcccttctagcatatcgagctagtctccaaggagtt
atggcagggaacaatttcaattcatctcctggttctatgcagctgcctcaacagtctagg
atgacacaacagcatggttcctctcatgagggcccacataggggtcaagctgttgagcca
caagtaccaaatccagtccatcaagcttatcttcagtatgctttccaggctgctcagcaa
aagtcggcgctggccttgcagtcacagcagcatgctaagatgggaatattgggccctcca
tctgggaaggaccagggcatgcgaatggggaatcctaaaatgcaggatctcatttccatg
caggcgcatactcaggctcaggtgccgacatcaaaaaactcatctgaacaatttggtcgt
ggtgaaaagcagatggatcaaggacaacaatcagcctccgagcaggggactgagcaaaag
ccttcaacccaggcaacaagtattgggcatttaatacccggaaatatggtgaggcctttg
caagcatcacaagctcagcagaatatccaaaacatggcaaacaaccaactcacgatgtct
gcccagttgcaggcaatgcattcgtgggcacttgaacgcaatattgatctctcactgcct
gcaaatgccaacttgatggcgcagctcattccagtgttacaatctaggatggctacacag
caaaaaccaaatgaaagtaacatgggtgcacagtcaacatctgttccagtgtcaaaacag
caggtcacctctccaccagttgccaatgagagttctccccatgctaattcatcaagtgat
ttatctggacagtctggatctgcaaaggctaggcagactgtttctcccagcccttttggt
tcaacgccaaatgctggcattgtcaaacatgctaacaacactgcattgcagcagttttct
actcatggcagagagaatcaggtcccttctagacagcctgctgtgattggtaatggaatg
cctccaatgcatcccccacagtcatctcccaacatgagccagggcgttgatcattctagt
gtgaaaaattcaataagtagccctgaagcactgcagatgcagtacctcaggcaatcaaat
cgaacttctccacaagctgtagttcctactaatgatggggcctctaacaacaatatcgtt
tcacaaggtgggtcgactattcagacaccgcagcagcgctttggattcaccaagcagcaa
ttgcacgttcttaaagcacaaatcctagcatttagacggctaaagaaaggagaccctggt
ctcccccaagaacttcttcgggcgattgctccaccaccccttgatcttcagctgcagcag
aaactgccccccacgggaggaaataatcaggataaatctgatgggaatattgtggctgac
tatccgaggcatatggagtccaatgagaaaactactcatgctgtcacgtcaattaatgga
caaagtttcctaacagaggaagcttttgtgggagaagagaaagcaaccgtcaccacagct
catatgcaaggtgtgccagttgtaatgaaggatcctccaccagcagtatctgctggaaaa
gatgagcagcaatccactgtacattctgttaagtcagaccaggatgttgaacatggtatt
cataggcctccagttagaagtgattttccagcagataggggaaagtctattgcaccacag
ggagctatatctgatgcagcgcaagttaagaaacctgcacaagcgagcactgctcctcaa
ccaaaagacattggatccaccagaaagtatcatggacccctatttgatttcccctttttc
accaggaaacatgactcctttggatcggccatgatggttaataacaataatcatctaaca
ttggcatatgacgtcaaagaccttctctttgaggaaggcgtggaagtgcttaccaagaaa
agatccgaaaatttaagaaagattggtggtctactggcagtaaacttagagaggaaaagg
ataaggccagatcttgtcttgaggttgcaaattgaagagaaaaagcttcgacttttagat
ctacaggcccggttaagggatgaaattgatcaacagcaacaggagataatggcaatgcct
gacaggccatataggaagtttgtccgactgtgtgagcgtcagcgtatggaactcaccaga
caagtacaggcctctcagaaagctgtgagagagaagcaactgaaatccaccttccagtgg
cgtaagaagcttcttgagactcactgggccatccgtgatgcacggactgcacgtaatagg
ggagttgccaaatatcatgagagaatgttgagggagttttcaaaaagaaaggatgatgat
aggaataagaggatggaggcattaaagaataatgatgtcgaaagatatagggagatgttg
ctggagcagcagacaagcattccaggtgaggccgcagagagatatgctgttctctcatcg
ttcttgactcagacagaagaatatctacataaactgggaaataaaataactgctgccaaa
aatcaacaggaggtggaggaggcagcaaatgccgctgcagtagctgcacgattgcagggt
ctctccgaagaagaggttagggcagctgcagcatgtgctggggaggaagtaatgataaga
aatcagttcatggaaatgaatgcacctaaggatagttcatctgttagcaagtactatacc
cttgcccatgctgtgaatgaaagggtcgtgaggcaaccctcaatgctacgtactggaacc
ttaagagactatcaacttgttgggttgcaatggatgctatctttatataacaataaatta
aatggaatcttggcagatgagatgggtcttgggaagactgtacaggtaatggcattgata
gcttacttgatggagttcaaagggaactatggcccacatcttataatagttccaaatgct
gttctggtaaactggaagagcgagctccatagttggctgccatctgtgtcatgcatttat
tatgttggtgggaaggatcaacgatcaaaattattttctcaagaggtttctgctctgaaa
tttaatatccttgtgacaacatatgagttcataatgtatgatcgttcaaaactttcaaaa
attgactggaagtatatcataattgatgaagcacaacggatgaaggatagggagtcggtt
ttagcacgtgatcttgatagatatcgctgccagaggcgcctgctactgactgggacacca
ttacagaatgatttgaaggaactctggtcactcttaaatctacttcttccagaagtcttt
gataatcggaaagcatttcatgattggttctcaaaaccctttcagaaggaaggtcctacg
cagaatgcagaggatgactggctggagactgaaaaaaaggttatcatcatccaccgactt
catcaaattctagagccctttatgcttaggcgtcgtgttgaagatgtggaaggctcactt
ccgcctaaggtttccatagttttaagatgcaggatgtcagctattcagagtgccatttat
gattggatcaaatccactggtactcttcacgttgatcctgaagatgaaaagcgcagggtt
caaaaaaacccaaattaccaggctaaggtgtatagaactctaaataacagatgtatggag
cttcgtaaagcctgcaatcatcctttgctcaattacccatatttcaatgacttctctaag
gattttcttgtaagatcatgtggaaaattgtggatcatggataggattcttatgaaactt
cagagaacagggcatcgagtactgctctttagtaccatgactaaactccttgatatattg
gaggaatacttgcaatggcgacggcttgtctacagacgaattgatggaacaactagttta
gaagatcgtgaatctgcgattgtggactttaatagcccagactctgactgcttcattttc
ctgcttagtattcgtgcagctggtagaggtcttaatcttcaatctgctgacacagttatc
atatatgatcctgatccaaaccctaaaaatgaggaacaggcagttgctagagcccaccgt
attggacagactagagaagtcaaagtgatttatatggaagcagttgtcgacaaaatctct
agccatcaaaaggaagacgaagtaagaaatggaggtactgttgatatggaggatgacctt
gctggtaaggatcgttatatggggtctattgagagcctgataagaaacaacattcaacaa
tataaaattgatatggctgatgaggttatcaatgctgggcgctttgaccaaagaacaaca
catgaagagagacgcctgacgctagagacattattgcatgatgaggagaggtatcaagaa
actctccatgatgttccctcactgcaagaggtcaatcgcatgattgccaggagcaaagag
gaagtagaattgtttgatcaaatggatgaggaactagattgggctgaagacatgacacgg
tatgacgaggtacctaagtggcttcgagcaagtactcgagaagtaaattccactgttgca
gctctttcaaaaaggccatcaaaaaacactttattggctagtaatgttggcatggaatct
agtgaagtgggttctgattcatctccaaaaactgagaggaaaaggggacggcccaaagga
agaaagaatcctaattacaaggaattggatgatgaaaatggggaatactctgaagcaagt
tcagatgagagaaatggatactctatacatgaagaagagggagaaattggagagtttgaa
gaggatgaatttggtggtgctgttgagggaccactaattaataaagaccaatcagaagag
gagggtccagtttgtggtggtgagtttgagtatccccaggcttcagaaagcacaaaaaac
aaccctatgctggaagaagcaggttccatgggatcatcgtcagacagtcaaagattgaca
caaatggtttcaccttccgtttcttcccagaaatttggttccctgtctgctttagaggct
aggccaggttctctctcaaaaaggctgccagatgaactagaggaaggggaaattgcagtg
tctggagattctcacatggatcaccaacaatctggaagttatgaccgggatgacggtgag
gaagagcaggttttgcagcccaaaataaaacgaaaacgcagtcttcgggtccgtccccgt
catacaatggaaaggccagaggagaagtctggcaatgaaatacaatctttcgagcatgga
gattcatctctgttgccattgcaagtggaaaataagtatcaagcgctgttaagaactgac
cctggaacaaaaccgtatggagagtccagtgcttctaagcatgatcaaaatgactcatcc
tcaaaaattaggcgaaatttgccatcaaggagaatcgctaatgcatcgaaattgcatgct
tcgccaaaatctagcagattaaattgtatgtctgttcctgcagaagatgctgccgaacag
tcaagagaaagttgggatgctaaagttatggattcaagggggacaaaaacatttggcact
aagatgcccgacagcatccagagaaggtgcaagagtgtgattagcaagctccaaaggaaa
attggtaaggaaggtcctcaaattatacctttgctaactgatttgtggaagaggattgag
aacgctgggtacatgggtggatcgggaaataatattttggatttgcgaaagatcgatcag
cgtattgacagattggagtatagtggagtgatggagcttgtgttggatgtacagttcatg
ttgaaaagtgcaatgcatttttatggcttctcacatgaggtgagatctgaagcaaggaaa
gtgcatgatctcttttttgatatcttgaagattgcatttcccgacacagattttcgagaa
gccagaaatgcgctctccttttcgggtacattttctacaacttctgctccttccccaaga
caagctactgttggcccaagcaagcgacagaagttggtaaatgaggtggaacctgacacg
tgccttccacagaaggtactgcaacgtgggaaaatatccagcggggatgactcaagaatc
agaagccatattcctcagaaggattcaaggcttggggctggaattggcagtagtcgggag
caatgtcagcaggatgatcctccacttcttactcatccaggggagctggtaatctgtaag
aagaagagaaaagaccgggagaaatcagtggtgaagcctagaactggatcagttggccct
gtttcaccacctagcatgggtcgtggtatgagaagtccaggtccaagttcagtgcccaag
gacacgagacagacccaacaaaccacctatccgcaaggatggaccaatcagcctggtacc
gctcaaccgacgaatggggatggagggactgttggttgggcaaatcctgtaaagcggttg
aggacagattctgggaaaagaaggccgagccatgtatga
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integrated database retrieval system
