KEGG   Juglans regia (English walnut): 109002433
Entry
109002433         CDS       T05245                                 
Name
(RefSeq) protein CIA1-like isoform X1
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
jre  Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:jre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:jre03036]
    109002433
   03400 DNA repair and recombination proteins [BR:jre03400]
    109002433
Chromosome and associated proteins [BR:jre03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    109002433
DNA repair and recombination proteins [BR:jre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     109002433
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 NBCH_WD40 Beta-prop_ELP1_1st WD40_MABP1-WDR62_1st Beta-prop_HPS5 B-prop_COPA_B_2nd DUF4082
Other DBs
NCBI-GeneID: 109002433
NCBI-ProteinID: XP_018835730
UniProt: A0A833XVY5 A0A2I4FVR1
LinkDB
Position
4:34023545..34027842
AA seq 354 aa
MELYEGGCELKLLETLEGHSDRVWSLAWNPVTAAAGTPLVFASCSGDKTVRIWENTPSHS
ASWTCKAVLEDTHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDYECVSTLEGHENE
VKSVSWNASGTLLATCGRDKSVWIWELQPGNEFECVSVLQGHTQDVKMVQWHPSTDVLFS
CSYDNTIKVWAGDDDDWQCVQTLGEPNSGHSSTVWALSFNASGDKMVTCSDDLTLKIWET
DNIQMHSGDGYAPWRHLCTLTGYHDRSIFSVHWSSEGIIASGAADDAIRFFVENRDGLVD
GPTYKLLLKKEKAHDMDINSIQWSSGEKRLLASASDDGTIKIWELASLCMENGH
NT seq 1065 nt   +upstreamnt  +downstreamnt
atggagttgtacgaaggagggtgcgagctgaagctgctcgaaacgctggaaggccacagc
gacagggtttggagcctagcctggaacccagtcaccgccgccgcggggacccctctcgtc
tttgcctcctgtagcggcgacaagaccgtccgaatctgggagaacactccctcccactcg
gcttcttggacctgcaaggcagttctggaagacacgcacaccaggaccgtccgatcttgc
gcttggtcgccgtcggggaagttattggcaaccgcgagcttcgatgccaccactgccatt
tgggaaaacgttggtggtgactacgaatgtgtttccactttagagggtcatgaaaatgaa
gtgaaaagcgtgtcttggaacgcgtcggggactctacttgcgacgtgtggccgagataaa
tcggtttggatttgggaactgcagccggggaacgagttcgagtgtgtctcagtgttgcag
ggacatactcaagatgttaagatggttcagtggcatccgagtacggatgttttgttttct
tgtagctacgataacactattaaggtttgggctggtgatgatgacgactggcagtgtgtt
cagactttgggcgaacctaacagtggccactcttctaccgtttgggccctctctttcaat
gccagtggagacaaaatggtcacatgcagtgatgatcttaccctaaagatatgggaaaca
gacaacatacagatgcactctggtgatggctatgctccttggagacatctgtgcactctc
acaggttatcatgatcgatcaattttctcagttcattggtcgagcgagggtattattgcc
agtggagcagctgatgatgccatacggttttttgtggagaacagagatggtttggttgat
ggacctacctataaattgctgctgaaaaaggagaaggcccatgacatggatattaattca
atacaatggagctctggggaaaaacggctattagcttctgcaagcgatgatggtacgata
aagatatgggagctagcgtcattatgtatggaaaacgggcactag

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