Juglans regia (English walnut): 109003970
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Entry
109003970 CDS
T05245
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
109003970
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
109003970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
109003970
NCBI-ProteinID:
XP_018837860
UniProt:
A0A2I4G1V6
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Position
13:complement(28158937..28254858)
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AA seq
1607 aa
AA seq
DB search
MDQTQHQRPVPASAPAPASRAYQFHPARAAIVDLFDLYLGRSSRQKPEDSSREPPNKTQK
RVHALNRELPPRNEQFLIDFEQLQSQFAEQDQLRSVTESIFISLVVKCSGHAPRAEFLLF
ALRNLCTIGFINWDTLLPSLLSSVSSAEMTVGSQAMPAVSSTSLPQTGMLPPSSSIPNPS
TFQSSNPASPLTTVHGIGSPAQCALEPPPCATLSPVKSSDILCNGQQPTARINSSIRDNA
ISSLRQLCCKIILTGLEFDLKPVTHAEIFYHMLNWLVNWDQRQQGIDEFDGAKSWRPHKA
LIEWLHSCLDVIWLLVEEDKCRVPYYELLRSGLQFIENIPDDEALFTLILEIHRRRDMMA
MHMQMLDQHLHCPTFGTHRVLSQTTPNISGEATANARYSPITYPSVLGEPLHGEDLAMSI
QKGSLDWERALRCIRHALRSTPSPDWWKRVLLVAPSYRSPQAPTPGAVFTSEMICEATID
RIVELLKFTNSEINCWQEWLVFSDIFFFLMKSGCIDFVDFVDKLVSRVMEGDQHILRTNH
VTWLLVQLLRVELVMNALNSDARKVETTRKVLSFHREDRSSDPNNPQSILLDFISSCQNL
RIWSLNTSTREYLNNEQLQKGKQIDEWWRQVSKGDRKMDYMNMDDRSIGMFWVVSYTMAQ
PACETVMNWLSSAGVTEFLPGPNLQSNERLMVMREVSPLPMSLLCGFSMNLCSKLAYQME
ETLFSGQGVPNIAMVETYTRLLLIAPHSLFRPHFSNLAQRNPSLLSKPGVTLLVLEILNY
RLLPLYRYEGKSKALMYDVTKIISTLKGKRGDHRVFRLAENLCMNLIFSLRDFFSVKREG
KGPTEFTETLNRITIITLAITIKTRGIADADHLLYLQTMVEQIMATSLHTWSEKTVRYFP
SVLREALMGRMDKRSLEIQAWQKAETTVINQCTQLLSPSADPSYVTTYISHSFPMHRRYL
CAGAWILMHGHPENINSVNLARVLREFSPEDVTENIYTMVDVLVHHIQMELQHGHPLQDL
LLKVCANLAFFVWTHELLPLDILLLALIDRDDDPHALRIVINLLERQELLQRVKLYCMNR
GTPEHWLYTGMFKRVELQKALGNHLSWKDRYPTFFDDVAARLLPVVPLIVYRLIENDATD
PAERILAMYSSFLAFHPLRFTFVRDILAYFYGHLPGKLIVGILNVLDLSKIPYSESFPQL
ISSSNPVMCPPMDYFTTLLLGLVNNVIPPLHNNSRFGSMCDPSGRTPYNKTAATSQSGLA
NASEGQKSFYQIQDPGTYTQLVLETAVIELLSLPVSASQIVSSLVQIVVNIQPTLIQSSN
GLHGAPNGVGQASVLPTSPSGGSTDSLSAGRSTPLVSGINTSNIVSRSGYTCQQLSCLLI
QACGLLLAQLPPEFHLQLYAEASRIIKESWWLTDGKRSLGELDSAVGYALLDPTWAAQDN
TSTAIGNTVALLHSFFTNLPQEWLEGTHVIIKHLRPVTSVAMLRIAFRIMGPLLPRLANA
HSLFNKTLSLLLSILVDVFGRNSQTSTPVEASEIADLIDFLHHVIHYEGQGGPVQANSKP
RPEVLALCARASENLRPDVQHLLSHLKPDVNSSIYAATHPKLVQNPS
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaacccaacatcagcgacccgttccggcttcggctccagctccagcttctcgg
gcctatcagttccacccagcccgtgccgctattgttgatctcttcgacctctacttggga
agaagtagccgccagaaacctgaagactctagtcgagaacctccgaacaagacacagaag
cgtgtgcatgcgcttaacagagaacttcctcctcgcaatgagcagttcctcatagatttt
gagcaacttcagagccagtttgcagagcaagatcagttgcgttctgtgacggaatctatt
tttatatctctggttgtgaagtgtagtggtcatgcaccacgagctgaatttcttctcttt
gctttacggaacttgtgcactataggtttcattaattgggatactcttttgccatctctt
ctttcatcggtctcctctgcagagatgactgtggggagtcaagcaatgcctgctgtttca
tctacaagtttaccacagactgggatgctgccgccttcaagctcaattccgaatccttct
acttttcagtcctcaaatccggcatctccattaactacagttcatggtattggatcccct
gctcaatgtgctctcgaaccaccaccttgtgcaactttgtcaccagtcaaatcctctgat
attttgtgtaatggacaacaacctacagcaaggataaattcatcaataagagacaatgct
ataagcagtctgcggcaactgtgttgcaagattattttaactggtcttgaatttgattta
aaaccagtgactcatgctgaaattttctaccacatgctgaattggctggtcaattgggat
caaagacaacaggggattgatgaattcgatggagcaaaatcttggagaccacacaaggcc
cttattgaatggctgcacagttgtttggatgtgatttggcttttagttgaagaggataaa
tgccgagtaccctattatgaattactgcgcagtggcttgcagtttatagaaaacatacct
gatgacgaagccttatttacactaatcttggagatccatagaaggcgagatatgatggcc
atgcacatgcaaatgttagatcaacaccttcattgccctacctttggaactcatcgagtt
ttgtctcagacaactcccaatatttcaggtgaagcaacagcgaatgcacgatattcgccg
atcacttacccaagcgtacttggagaacccttgcatggagaggatcttgcgatgtctatt
cagaagggaagtttggactgggagagggctttgcgttgcataaggcatgctcttcgcagt
actccttcacctgattggtggaagcgggtgcttcttgtggctccttcctataggtctccc
caagcgcccactcccggtgctgtttttacttctgaaatgatctgcgaggcaacaattgat
agaattgttgaactcttgaagtttacgaattcagagataaattgctggcaggagtggctt
gttttttcagatatcttcttttttcttatgaaaagtgggtgtattgactttgttgatttt
gtggacaagctagtttcacgggttatggagggtgatcagcacattcttagaacgaatcat
gtgacttggttacttgtacaacttctaagggttgagcttgtgatgaatgctctgaattca
gatgcaagaaaggttgagacgaccagaaaagttctatcatttcatagagaagatagaagc
tctgatcctaataatcctcaaagtatccttcttgactttattagtagttgccaaaatttg
cgtatttggtcattgaacacatccaccagggaatatttgaataatgagcagcttcagaag
ggaaagcaaatagatgaatggtggaggcaagtgagtaaaggggatcgcaagatggattac
atgaatatggatgatagatcaattgggatgttctgggttgtgtcttacaccatggcacaa
cctgcttgtgaaacagtaatgaattggctttcgtctgctggagttacagaattcttacca
ggaccaaatctacagtcaaatgagaggttaatggttatgcgagaagtaagccctttgcca
atgtcattattatgtggcttttccatgaacctatgctcgaagctggcctatcaaatggaa
gaaactttattttctgggcagggtgtgcccaacattgctatggttgaaacatatactaga
ttgctgctcattgcacctcactcattattccgtccacacttcagcaatttggcacagagg
aacccatctttattgagcaagcccggggtaacactattggtgcttgaaattttgaactac
cgtttgcttccactatacaggtatgaaggaaaaagcaaagccttgatgtatgatgtcaca
aaaataatttctacactaaaagggaaacgtggagatcatcgtgtatttagattggctgaa
aacttgtgcatgaatcttattttctcactcagagattttttctcggttaaaagggaagga
aagggtcctacagaattcacagaaaccctaaatcggatcaccataataactcttgccata
accattaaaacgcgtggaattgccgatgcagatcacctgctttaccttcaaactatggtg
gaacagataatggcgactagtctacatacatggtctgaaaaaacagtgcggtactttcct
tctgttctacgtgaggccttaatgggtcggatggataagaggagcctggagattcaagca
tggcagaaggcagaaacaactgtgattaaccaatgcacacaacttctttcaccatcagct
gatccttcttacgttacaacctatatcagtcacagtttccccatgcaccgacgatatctt
tgtgctggagcttggatactgatgcatgggcacccagagaacataaacagtgtaaacttg
gcacgtgtgctgagggagttttccccagaagatgttacagagaatatttacacaatggtg
gatgtactagtacatcatattcagatggaacttcagcatggacatcctttgcaggacctt
ttattaaaagtctgtgcaaaccttgcattttttgtctggacccatgagttgcttcccctg
gatattttgcttctagcacttatcgaccgtgatgatgatccccatgctttgcgtatagtg
attaatctccttgagaggcaagagcttctacaaagagtgaaactatattgtatgaatcgt
ggaactccagagcattggctttacactgggatgttcaagcgagttgagttgcagaaggct
cttgggaatcatctctcatggaaggacaggtatcccacattctttgatgatgttgcagca
cgtttacttccagttgtgcccttaattgtttatagacttattgagaatgatgccacggat
ccagctgaaagaattctagccatgtattcctcgtttcttgctttccaccccctaagattt
acatttgttcgtgacatacttgcatatttctatggtcatcttcctgggaagctcatagtc
gggatattgaatgtacttgatctcagcaagataccttattcagagtctttcccgcagctc
attagttcatcaaatcctgtcatgtgcccacctatggactatttcactactctcttattg
ggacttgtgaataatgttatacctccactacataacaactccagatttggatcaatgtgt
gatccctcagggcgtactccatataataagactgcagcaacttctcagtctgggctggca
aatgcttctgagggccaaaagtcattctatcaaattcaggatcctggcacctatactcag
cttgttcttgaaactgctgttatagaattactctctctccctgtgtctgcatctcagatt
gtgtcttcgctggtccagatagtcgtcaatatacagccaaccctaattcaatccagcaat
ggtctacatggagctccaaatggtgttgggcaagcttcagtattgcctacatccccttca
gggggaagcacagattccttgagtgcaggcagatcaactcctttagtttcaggaattaat
acctcgaatattgtttctcgaagtggttatacttgccaacaactgtcttgcttactgata
caagcttgtggtctcctacttgctcagctcccccctgaatttcacttgcaactttatgcg
gaggcatcacgtataataaaagagagttggtggctcacggatgggaagaggtcactgggg
gaactagactctgctgttggctatgctttgttggatccaacatgggctgctcaagacaat
acctcaacagctattggtaatacggttgcccttctgcattcttttttcactaacctccca
caggaatggctagaagggacccatgtcatcattaagcatctcagaccagtgacatcagtc
gcaatgttgagaatagcatttcgtataatgggcccattgctcccaagacttgccaatgct
catagtctcttcaataagacactctccttacttttaagcatactggttgatgtcttcgga
aggaattcacagacatcaactcctgtagaagcatcagaaatagcagatctcatagacttc
ctccatcatgttatccattatgaagggcagggagggcctgtgcaagctaacagcaaacct
cgaccagaggtattggctctatgtgcgagagcatcagaaaatttacgtccagacgtacag
catcttctgtcccatctaaaacctgatgtaaattcttccatctatgctgctactcatcca
aagctggtccagaatccatcataa
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integrated database retrieval system
