Juglans regia (English walnut): 109004159
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Entry
109004159 CDS
T05245
Name
(RefSeq) WD repeat-containing protein 43-like isoform X1
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
jre
Juglans regia (English walnut)
Pathway
jre03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109004159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jre03009
]
109004159
Ribosome biogenesis [BR:
jre03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109004159
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Utp12
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
CFAP251_N
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_ACSF4
WDR90_beta-prop_4th
Beta-prop_HPS5
NBCH_WD40
PQQ_2
Cytochrom_D1
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
109004159
NCBI-ProteinID:
XP_018838158
UniProt:
A0A2I4G2N0
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Position
7:complement(9308298..9327998)
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AA seq
628 aa
AA seq
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MGSSNIRDLLTSFSPSLDFFAISSGDGRIKIWETLKGQIQTEFSDITSTDEINILTRHER
GHLSVDYTCMRWLSLDRKRKRKLGYSLLVLGTGSGDILALDVSAGQLKWRISDCHPGGVN
AISSPTNGSCIYTAGADGMLCEIDSLSGNLLQKFRASTKAISRISVSSDGKILATASAQL
KIFNSSDYKKMQKFSGHPGAVRCMIFSEDGKYILSSAVGERYIAVWRISGSKKQSASCVL
AMEHPAVVLDSRCIDNGEASGAGLYVLAISEAGVCYLWFGQNIEELRNNKPTKVSLSFED
MLSINHKGALPTIFAAKLQAITKPMSGQIFVAYGLPVKPSFQKILVHSGSDIRLNISNDG
VLLPISQSRIKSKKGLDFQNRVTALDRANAEDAVLPIPKIYSHEKKKTYTNMIVEPDEVT
AHSSGSNSQVKLVESEDDMDEVEVETEAFCMEDKLRSLGILSNGDDLTLDCTVDFATFKG
VNLESEMPPKKIRASVLSMDPSDAYKLLQVFVSKWQFRTCSGKYALPWIYHILLNHSHHV
MSQEPTSQILNSLYKITKPRGAAIQPLLQLSGRLQLVMAQIDRALQNKTRISAYDSQINE
SEDQGEEVDETLYGEEDDESELSSDDNS
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgggatcatcaaatatcagagatttgttgacatcatttagtccttctttagacttcttt
gccataagctctggagatggtcgaattaagatctgggaaactttgaagggccagatacag
actgaattctcagacatcacctcaactgatgagataaatatattaacaagacatgaaaga
gggcacctttcagttgattatacatgcatgaggtggttatctttggacagaaagagaaaa
aggaagcttggttactcgttgttagtcttaggaacaggtagtggtgatattttagcactg
gatgtctctgctggtcaattgaaatggagaattagcgactgccaccctgggggtgttaat
gccatttcatctcctacgaatggttcctgtatttatactgcaggtgctgatggcatgtta
tgtgaaattgattctctgtcgggaaacctgttgcagaagttcagagcttctacaaaggca
atttcccgtatatctgtttcgtcagatgggaagatattagcaactgcatctgcacagttg
aagattttcaatagttctgattacaaaaagatgcagaagttttctgggcatcctggggct
gttcgctgtatgattttttctgaagatgggaagtacattctctcctctgctgttggtgaa
agatatatagcagtatggaggataagtggcagcaaaaagcagtcagcgagctgtgttctt
gcaatggagcaccctgctgtagtacttgacagcaggtgcattgataatggggaagccagt
ggtgcaggtctatatgttttggctatttcagaagctggggtttgttatctttggttcggt
cagaacattgaggagctacgcaataacaagcccacaaaagtctcattgtcttttgaggac
atgctatctataaatcataagggtgcattacctacaatatttgctgcaaaattacaagcc
attaccaaacctatgtctgggcagatctttgttgcttatgggttgccagtaaagccatcc
tttcagaagattttagtgcattctggctcagatataaggttgaatatctccaatgatggg
gttcttctaccaattagtcaatctcgcatcaaatctaagaaaggattagattttcaaaat
agagttactgcattagaccgcgcaaatgcggaggatgccgtacttcctattccgaagatt
tattctcatgaaaaaaagaaaacatatacaaatatgattgttgagcctgatgaggtaacg
gctcattcgagtggcagtaacagtcaagtcaagcttgtagagagtgaagatgacatggat
gaagtagaagtggaaactgaagcattttgcatggaggacaagctgagatcattagggata
cttagtaatggagatgacctaacattagactgtacggttgattttgcaacattcaagggt
gttaatcttgaatctgaaatgccaccgaagaagataagggcatctgttctatctatggac
cctagtgatgcatacaagttactgcaagtgttcgtgtccaagtggcaatttaggacatgc
agtggaaagtatgcccttccatggatatatcatatacttttgaatcacagtcatcatgtt
atgtctcaggagccgacaagccagatactcaactccttatacaagattactaaacccaga
ggtgctgccatccaacctttattacaattatcgggtcgtttgcaacttgtgatggcacag
attgacagggctttgcagaacaaaactcggatttcggcatatgatagccaaataaatgaa
agtgaagatcagggtgaagaagttgatgaaactctttatggagaagaagatgatgaatct
gaattaagcagtgatgacaatagctag
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