KEGG   Juglans regia (English walnut): 109004482
Entry
109004482         CDS       T05245                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X2
  KO
K15361  WD repeat-containing protein 48
Organism
jre  Juglans regia (English walnut)
Pathway
jre03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    109004482
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jre03400]
    109004482
DNA repair and recombination proteins [BR:jre03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     109004482
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_DCAF4 RAWUL ANAPC4_WD40 Beta-prop_DCAF12 WDR90_beta-prop_4th VWA_3_C
Other DBs
NCBI-GeneID: 109004482
NCBI-ProteinID: XP_018838585
UniProt: A0A2I4G3Z3 A0A834CK74
LinkDB
Position
8:complement(29748332..29764018)
AA seq 700 aa
MGFDGRCSYLLYYFRVSCGLVQVNDAVLAGDNTLVSCSSDTTLKTWNCLTDGTCTRTLRQ
HSDYVTCLAAAEKNSNIVASGGLGGEVFVWDLESALVPLSKSGDAMEEDSPNGISGSGNS
LPITSLHTISSSNSISTHTNQSNGYVPIAAKGHKESVYALAMSDSGTLLVSGGTEKVVRV
WDPRTGSKTMKLRGHTDNIRTLLLDSTGRLCLSGSSDSMIRLWDLGQQRCVHSYAVHTDS
VWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQLALQDDNIWVATSDSS
INRWPVEGRNPQKVFQRGGSFLAGNLSFSRARVSLEGSTPVPVYKEPTLIIPGTPGIVQH
EILNNRRNVLTKDTFGSVKLWEISRGIVIENYGKVSFEEKKEELFEMVSIPAWFTVDTRL
GSLSIHLDTPQCFSAEMYSTDLNIIGKPEDDKVNLARETLKGLLAHWLAKRKQRFGSQPS
ANGDVSSGKDISHRSLTHSRIEVDFNAENDAMVYPPFEFSTVFPPSIITQGSHGGPWRKK
ITDLDGTEDEKDFPFWCLDCVLNNRLPPRENTKCSFYLHPCEGSTVQILTQGKLSAPRIL
RIQKVVNYVIEKMVLDKPVDGINTDGTFASGLVGGQLTHTVVGDGSFRSGFKPWQKLKPA
IEILCNNQVLSPDMSLATVRGYIWKKSEDLILNYRVVQGR
NT seq 2103 nt   +upstreamnt  +downstreamnt
atgggctttgatggaagatgcagctacctgctctactactttcgagtctcatgtggactg
gtgcaggttaatgatgctgttcttgcaggtgataatacacttgtttcctgctcctcagac
accacccttaagacgtggaactgtttgactgatggaacatgcacaaggactctccgtcaa
cattctgactatgtcacttgtcttgctgctgctgaaaaaaatagcaatattgttgcctct
ggtggacttggaggggaggttttcgtatgggatcttgagtctgcacttgttccactctca
aagtctggtgatgcaatggaagaggattctccaaatggcatcagtggttcagggaattca
ctaccaattactagtttacacactataagttcgagcaacagcatttctacacatacaaat
cagtccaatggatatgttccaattgctgccaaaggccataaggagtcagtttatgcattg
gcgatgagtgatagtggaacacttcttgtctctggtggaacagagaaggttgttcgtgtt
tgggatccaagaactggttcaaagactatgaagctacgaggtcatactgataatattagg
actttgcttctggattccactggcagactttgcttatcaggatcttctgattctatgatc
agactctgggatcttggtcagcagcgctgcgtgcactcctatgctgtacatacagattct
gtttgggcacttgccagcactccaacatttagtcatgtttatagtggtgggagagacctt
tctttatatttgacagacttggcaacaagagagagtcttttgctctgcacaggggaacac
cccattctgcaattggctttacaagatgataatatatgggttgcaacatcagattcttcc
atcaatagatggcctgttgaaggacgtaaccctcagaaggtctttcaaagaggtggttct
ttcttggctggaaacttatccttttctcgggcaagagtttccttagaaggatctactcct
gttcctgtttacaaagaaccaacgcttatcattcccggaactcctggaatagtgcagcat
gaaattttgaataataggaggaatgtgttgactaaggatacctttggttcagtgaagctg
tgggagatcagcaggggcattgtcattgagaattatggaaaggtgtcatttgaggagaaa
aaggaagagctatttgagatggtaagcattcctgcttggttcactgtggataccaggctt
ggaagtttatctatccatttggacaccccacaatgcttttcagccgagatgtactcaact
gaccttaacattattgggaaacctgaggatgataaggttaatctagcccgggaaaccctt
aaaggacttttggctcattggttggctaaacgaaagcaaagatttggatcccagccttca
gccaatggggatgtgtcatctggaaaggatattagccatagaagtcttacccattcaaga
atcgaagttgattttaatgccgagaatgatgcaatggtatatcctccatttgaattttca
actgttttccctccttccatcattactcagggctctcatggaggtccatggagaaagaag
attactgatttagatggaactgaagatgagaaagactttcctttctggtgtctggactgt
gtgctaaataatcgcctacctccaagagaaaataccaagtgcagcttttatttgcatcca
tgtgaaggttcaactgtccagatcctgacacaagggaaactaagcgcgcctcgtatattg
aggattcaaaaagtagttaattatgttatagaaaagatggttcttgacaagcccgtggat
ggtataaataccgatggaacatttgcttccggacttgttggagggcagttaacacataca
gtggttggagatggatcctttcggtcaggatttaagccttggcaaaagcttaaacctgct
atagagatattgtgcaacaatcaggtcttgtccccagacatgagcttagccacagttcgg
ggttatatatggaagaaatctgaggaccttattcttaattatagagtggtccagggcagg
tga

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