Juglans regia (English walnut): 109004738
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Entry
109004738 CDS
T05245
Name
(RefSeq) cyclin-T1-4-like isoform X1
KO
K15188
cyclin T
Organism
jre
Juglans regia (English walnut)
Pathway
jre03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109004738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
109004738
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
109004738
Brd4/P-TEFb complex
109004738
7SK RNP complex
109004738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_N
CycT2-like_C
Cyclin_C
TFIIB
Cyclin_C_2
Motif
Other DBs
NCBI-GeneID:
109004738
NCBI-ProteinID:
XP_018838931
UniProt:
A0A2I4G4U8
A0A833XVG2
LinkDB
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Position
4:complement(16260380..16270015)
Genome browser
AA seq
598 aa
AA seq
DB search
MAGILPGESSYHGTSDGGSSRNSQDRQEEVGRWYLSRKEIEEHSPSRRDGIDLKKETYLR
KSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRTIATVCMFLAGKVEETP
RPLKDVILVSYEIIHKKDPAAAQRIKQKEVYEQQKELILLGERVVLATLGFDLNVHHPYK
PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD
GEKVWWQEFDVTPRQLEEVSNQMLELYEQNRVPPSQGSEVEGSVGSGLSHQAPAKPPYVN
EEQASKQISSHLAPDYSFADNHGMPARSTQYRSNENGSAEMDSVITEHMVDVETKDDQHF
DNFPLKENMREVPNRSKVGIERAGSEDQERNGGRNETAEPGEWRDEGVSRKSGSLVGRSV
DLRKGPLGQSPKEAIKIDKVKVKAALEKRRKSRGEITRKKDVMDEEDLIERELEDGVELA
AEDEKNKRDRRQSWSKSENLDHGKGHEDVGVGNHLKGQLSRGLEGENAEEGEMLDDASPM
LSSRKRKAGSPRDRQLEGKKRHDYMPSYHHDYIDDGHRMSRVGYADRDHRRHSQENHL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggctggaattttacctggggagtcatcgtatcatggcacatctgatggtgggtcttca
agaaattctcaagacaggcaagaggaagtgggtcgttggtatctgtcaagaaaggaaatt
gaagaacattccccatcaagaagggatgggattgacctgaagaaagaaacatatttacgc
aagtcgtactgcacatttttgcaggatttgggcatgaggctaaaagtgccccaggtaacc
attgccacagcaataatattttgtcatcggtttttccttcgtcaatcgcatgccaagaat
gacagaaggacaattgcaactgtgtgtatgttcctcgctgggaaggtagaagaaacccct
cgtccgctcaaggatgttattctcgtttcttatgagataatacacaaaaaagatcctgct
gcagcccagaggatcaaacagaaggaagtatatgaacaacaaaaagagctaattttattg
ggggaacgggtcgtacttgccactttgggttttgacctcaatgttcaccacccatataag
ccccttgttgaagcgataaagaaatttaaggttgctcagaatgccctagcgcaagttgcg
tggaactttgttaatgacggtctgagaacatcgctctgcctgcaattcaagcctcatcac
attgcagcaggtgccattttccttgctgccaagttcctcaaagtgaagcttccatcggat
ggtgagaaggtctggtggcaagaatttgatgtcacccctcggcaattggaggaagttagt
aatcaaatgctggaactctatgagcaaaacagggtgcccccatcgcaagggagtgaagtg
gaaggaagtgttggcagtgggctgagtcatcaggccccggcaaaacctccatatgtgaat
gaggaacaggcttcgaagcaaatttcatctcatctagcgcctgattattcgtttgctgac
aatcatggcatgccagcaagaagcactcaatatcgaagtaatgaaaatgggagtgcagag
atggatagtgttattactgagcacatggtggatgtagaaactaaagatgatcaacatttt
gataattttcccttaaaggagaacatgagagaagtaccgaatagatccaaggtgggaata
gagagagctggtagtgaagaccaagaaaggaacggtgggagaaatgagactgctgaacca
ggagagtggagggatgagggtgtctcacgaaagtctggcagtttggttggtcgaagtgtg
gaccttcggaaaggcccccttggccagtcgcctaaagaagctataaagattgataaggtc
aaggttaaggcagcacttgagaaaagaaggaagtctcgtggggaaataacaaggaagaaa
gatgtgatggatgaggaggatctcattgagagggaacttgaagatggggtcgaattggca
gctgaggatgagaaaaacaaacgtgatagaaggcaaagctggtcaaaatctgagaattta
gatcatgggaagggccatgaggatgttggagttggaaaccacttgaaggggcaattgtcg
aggggattggaaggagagaatgcagaagagggagagatgttggatgatgcttcacctatg
ttgagcagccgtaagagaaaagctggcagcccacgggacaggcaattggaggggaagaag
cggcatgactatatgccgagttatcaccatgactatatagatgatggacataggatgagc
cgggttggttatgcagatagggaccacagaaggcattcccaggagaatcatttgtga
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