Juglans regia (English walnut): 109004748
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Entry
109004748 CDS
T05245
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jre03009
]
109004748
Enzymes [BR:
jre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109004748
Ribosome biogenesis [BR:
jre03009
]
Eukaryotic type
Pre-60S particles
Helicases
109004748
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
109004748
NCBI-ProteinID:
XP_018838956
UniProt:
A0A2I4G4X9
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Position
12:complement(31125314..31130317)
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AA seq
592 aa
AA seq
DB search
MDSDSPNRSSALTDTRFSDLNPSLSDPVLQALTQAGFEFCTPVQAATIPLLCSYKDVAVD
AATGSGKTLAFVVPLVEILGRTKTHPKPLQVMGIIISPTRELSSQIYDVAQPFVSTLPNF
KSVLLVGGVEVKADLKKIEEEGANLLVGTPGRIYDIMERVDGLDFRNLEILILDEADRLL
DMGFQKQINSIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVKVEVRAETKLVNGPSS
SGQLNFSKTPSGLHNAYMECEANKKPSQLVDLLIKNKSKKIIIYYMTCACVDYWGVVLPR
LSVLKGFSLIPLHGQMKQTVREKALASFKALSSGILLCTDLAARGLDIPDVDCILQYDPP
QNPDVFVHRVGRTARMGRQGNAIVFLLPKEEAYVEFLHIKRVSLVERKCSDEAPDVVPQI
QSAAKKDRDVMEKGVRAFVSYIRAYKEHHCSYIFRWKELEIGKLAMGYGLLQLPSMPEVK
HHSLSTEGFTPAENINLKEIKYKDKSREKQRKKNLLAKKEAQQREPKPDKPKKTPKPAAT
IMRKKTAKQRRAAQTIEDEDDLAREYRLLKKLKRGAIDESEFARLTGTDELL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggactccgactcgcccaaccgtagcagcgcgttaacggacacgcgcttctccgatctc
aacccttcactctctgacccggtcctacaggccctaacccaagctggcttcgagttctgt
acgccggtccaagccgccaccatccccttactatgcagctacaaagacgtggccgtagac
gccgccaccggctcaggtaaaaccctagccttcgtggtcccactcgttgagatcctcggc
agaaccaaaacccatcctaaacccctccaggtaatggggataattatctcgcccaccagg
gagttatcgtcgcagatatatgatgttgctcagcctttcgtttcgacactaccaaatttt
aagtctgtgttactcgttgggggagtggaagtgaaagctgacctgaagaaaatagaagag
gaaggagctaatttattggtcggcactccgggcagaatatacgacatcatggaacgcgtc
gacggcttggactttaggaacctcgagattctgattttggatgaggctgataggctattg
gatatggggttccagaagcagattaattccattatatctcgcttaccaaagcttcgtaga
actggtcttttttcagctactcaaaccgaggcggttgaagagctatctaaagcagggctg
aggaatcctgtaaaggttgaagttagggcagaaacaaagctggtgaatggtccttcatca
tcaggacaacttaacttttcaaaaacaccttcaggccttcacaacgcgtacatggaatgt
gaagcaaataagaaaccatcccagcttgttgatcttcttatcaagaacaagtcaaaaaaa
attataatatattacatgacttgtgcttgtgttgattattggggagtcgttcttccacgc
ctttctgttttgaaggggttctctttgatcccgttgcatggccagatgaagcagactgtg
agggaaaaggcattagcttcatttaaagctctttcaagtggtattcttttatgtactgat
cttgcagcacgtggacttgacattccagatgttgattgtatcctgcagtatgatcctcct
caaaatccagatgttttcgtacatagagtcggccgaactgcccgaatgggtagacaagga
aatgccattgtttttctattgccaaaggaggaagcttatgtagaattcctacatataaaa
agggtttctcttgtagagaggaaatgctcagatgaggctcctgatgttgttcctcagatc
cagtctgcagccaaaaaggaccgtgatgtcatggagaaaggagtcagggcatttgtttca
tatattcgtgcatataaggagcatcactgctcttatattttcaggtggaaagagcttgaa
attgggaaattggccatgggctatggcctattgcagctcccttcaatgcctgaagtaaag
caccactcactttcaactgagggcttcactccagctgaaaacatcaatttgaaggagatc
aaatataaagataaatctcgtgagaaacaaagaaagaagaatctgctagcaaagaaagaa
gcacaacagcgagaaccaaaacccgataaacccaagaaaaccccaaagcctgcagctacc
atcatgaggaagaaaacagctaaacagagacgtgctgcccagacaattgaagatgaagat
gatttggcacgagaataccgcctgctgaaaaagcttaaaaggggagctattgatgaaagt
gaatttgctaggttaacaggaactgacgagttactttga
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