Juglans regia (English walnut): 109004843
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Entry
109004843 CDS
T05245
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109004843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
109004843
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109004843
mRNA degradation factors
5'-3' decay
Decapping complex
109004843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
109004843
NCBI-ProteinID:
XP_018839094
UniProt:
A0A2I4G5B4
A0A834CXC5
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Position
4:complement(33760367..33765197)
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AA seq
370 aa
AA seq
DB search
MSQTGKLMPNLDQQSTKMLNLTVLQRMDPFIEEILITAAHVTFYEFNIESNQWSRKDVEG
SLFVVKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNASQEVNGIWFYNP
RECEDVANLFTRILNAYSKVPSKSKVSPSKSEFEELEAVPTMSVMEGPLEPSSTAPDAPE
DSSFQSIFGAATNIGSGGLNLANSRPSSQPIYHSSATLPLSSHLPNVVSSPAPTPQVPSL
SLLASSNPTPLQDTLDPIRSSNQVTNLLKPSSFFSPTTSSSSALMIPPISSSVPTAPLHP
PLNLQRPYGTPMLQPFPPPTPPLSLTPSSAPQIDGPFISRDKVRDALLMLVQDDQFIDMF
YKALVKVHHP
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaccggaaaattgatgccgaatctcgaccagcagagcaccaaaatgctcaac
ctcaccgtgctccagagaatggatcccttcatcgaagagattttgatcaccgcggcgcat
gtcacgttctacgagttcaatatcgagagcaaccaatggagtcgcaaagacgttgaagga
tctctttttgtcgttaagaggaacactcaaccgcggttccaattcattgtaatgaatcgg
cgtaacacagataacctagtggagaatctattgggagattttgagtatgaagttcaggtt
ccctacctgttgtatcggaatgcatcccaagaagttaatggtatttggttttacaatcca
cgggagtgtgaggatgttgcaaatctatttactaggattctcaatgcatattcgaaagtt
ccttcaaagtcaaaagtatctccaagcaaaagtgagtttgaggaacttgaagcagtccca
accatgtcggtgatggagggtcctctggagccatcatcaactgcccctgatgctcccgaa
gattcttcctttcagagcatttttggtgcagctacaaatattggaagcggtggtttaaac
ctagctaactcaagaccttcttcacagcccatctatcattcttctgcaactctcccttta
tcgtctcacttgcccaatgttgtttcctctcctgcaccaactccacaagtaccatcactc
tctcttttggcttcatccaatccaacccccctccaagacacacttgatccaatcagaagc
agcaatcaagtcactaatcttctgaagccctcttcatttttttcacccaccacttcctcc
tcatctgcattgatgatcccacctatttcttcatcagtgccaacagctcctctgcatcct
cctctgaatttgcagcgcccatatggcactcctatgcttcagccctttccaccacccact
ccaccactgtctcttactcctagttctgcgcctcaaattgatggaccatttattagcaga
gataaagttcgtgatgcccttctgatgcttgttcaggacgatcaatttattgatatgttt
tacaaagcattggtgaaggtgcaccatccatga
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