Juglans regia (English walnut): 109004847
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Entry
109004847 CDS
T05245
Name
(RefSeq) nucleolar and coiled-body phosphoprotein 1
KO
K03504
DNA polymerase delta subunit 3
Organism
jre
Juglans regia (English walnut)
Pathway
jre03030
DNA replication
jre03410
Base excision repair
jre03420
Nucleotide excision repair
jre03430
Mismatch repair
jre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109004847
03410 Base excision repair
109004847
03420 Nucleotide excision repair
109004847
03430 Mismatch repair
109004847
03440 Homologous recombination
109004847
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
jre01009
]
109004847
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jre03032
]
109004847
03400 DNA repair and recombination proteins [BR:
jre03400
]
109004847
Protein phosphatases and associated proteins [BR:
jre01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109004847
DNA replication proteins [BR:
jre03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
109004847
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
109004847
MMR (mismatch excision repair)
DNA polymerase delta complex
109004847
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
109004847
NCBI-ProteinID:
XP_018839098
UniProt:
A0A2I4G5C1
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Position
9:21806857..21812029
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AA seq
564 aa
AA seq
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MSALKRFGITKSVPKLYFLRSDRRERSMAQHETLGILEEIESLVSDQLQVVSYKWLSRNY
LVSSNSAKRLLQEFVEKHKSGLEVVYTLSGWLKKDLSNYHIRLVSGPKLAEAKQDFDGNC
SIQVYSVQACIPKDPAALWNAEFVQAEELFKQHFSTDNCLRDNRFCGIFNSFVKRNVDEI
PVSNANQLPKTAGGLGQCKSGIVYKNTMAPRSEQNKVQQSSQKVGLQSPGVVKDVKSESK
GTGVHGQDTKLSTDKEKVPPLPAGKKNVQNGKNPSGAGGSLANFWGRASAKSKPCGLADD
NTVIPVIPNPTVTSAEAQICADEAVEVVSSDDDGQDVNFKRASNAEGIRKRRVVFNFSDE
DEENEDAVNLASPDIPKVRSSLDQKQSTKILASEKSNLNFDKEIEDKPMVKEGIATNKES
NQPVRENSLVTSKATEAGTSSKERVQSGIPESDINRKNTPTLAVPNSPKRRKVLKTQIDE
RGREVTKVIWEGEETEAKKSDSSTTKKLDSSTSDNTISRLPATKKSPAMGNAAPSIPAGK
AGNKKAGNLKDPKQGNILSFFKRV
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcccttaaaagatttggcatcacaaaatcagtacccaaattatattttctccga
tcggacaggagagaaagaagtatggcacaacacgaaaccctaggaatactggaagagatc
gaatccctcgtctccgatcaacttcaagtggtttcctacaagtggctgagccgcaattat
ttagtgtcatcaaattctgcaaagaggttgcttcaggagtttgttgaaaaacataaaagt
gggttggaagtagtgtatactttgtctggctggttgaagaaagatctttcaaattaccat
ataaggcttgtttctggccctaaacttgcagaagccaaacaagattttgatggaaattgc
tcaattcaggtttatagtgtgcaagcttgcattccaaaagatccagctgcactttggaat
gctgagtttgtacaagctgaagagctttttaagcagcacttctcgactgacaattgcttg
agagataacaggttctgtgggatctttaattcatttgtcaagcggaatgtggacgagatt
cctgttagcaatgcaaatcaactgcccaaaactgctggaggcctagggcaatgcaaaagt
ggtattgtgtataaaaacaccatggctccacgatctgagcaaaataaagtacagcaatct
agccaaaaagttggtctgcagtctcccggtgtggtaaaagatgtcaaaagtgaaagcaag
ggcacaggagttcatggtcaggataccaagctttctacagataaagagaaagtccctccc
ttgcctgctggaaaaaagaatgtccagaatgggaaaaacccttctggtgctggaggttca
ttggcaaatttttggggtcgggcatctgcaaagtcaaagccttgtggccttgcagatgat
aatactgttattccagttattccaaatccaaccgtcactagtgctgaggctcaaatatgt
gctgatgaagctgtagaggttgtcagcagtgatgatgatggccaagatgtcaattttaag
agagcctccaatgccgaaggaattagaaaaaggagggttgtatttaatttctcagatgaa
gatgaagaaaatgaagatgcagtcaatttagcatcaccagatattccaaaagttcgatca
tctctagatcagaaacaaagtaccaaaattttggcttcggaaaaatccaatttgaacttt
gacaaggaaatagaagataaaccaatggtcaaggaagggatagctaccaacaaggaatct
aaccaaccagtgagagagaattctctagttaccagcaaggccacagaagctgggacttcc
tctaaagagagagtacaaagtggtattccagaaagtgacataaacaggaagaatacacca
acacttgctgttccaaattcccctaaaaggagaaaagtgttgaagacacagattgatgag
cgaggaagagaagtaactaaagtaatctgggagggtgaagagacagaagcaaagaaatct
gacagtagcacaacaaagaaacttgacagctctacatccgacaatactattagcaggctt
cctgcaacgaaaaagtcaccagcaatgggaaatgctgccccatccattccagcaggcaaa
gcaggaaacaagaaagcagggaacttgaaagatcctaagcaaggaaacattctttcattc
ttcaagagggtgtga
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