KEGG   Juglans regia (English walnut): 109004902
Entry
109004902         CDS       T05245                                 
Name
(RefSeq) protein transport protein SEC13 homolog B-like
  KO
K14004  protein transport protein SEC13
Organism
jre  Juglans regia (English walnut)
Pathway
jre03013  Nucleocytoplasmic transport
jre04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109004902
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109004902
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jre03019]
    109004902
   04131 Membrane trafficking [BR:jre04131]
    109004902
Messenger RNA biogenesis [BR:jre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     109004902
Membrane trafficking [BR:jre04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    109004902
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    109004902
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    109004902
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR35_TULP_N Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_Vps41 WD40_Gbeta ANAPC4_WD40 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_IFT140_1st EIF3I Beta-prop_WDR19_1st Beta-prop_WDR41 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_WDR36-Utp21_2nd Beta-prop_HPS5 Beta-prop_ELP1_1st WD40_2 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 109004902
NCBI-ProteinID: XP_018839155
UniProt: A0A2I4G5J8
LinkDB
Position
7:44886069..44888345
AA seq 301 aa
MPSQKIETGHQDVVHDLAMDYYGKRVATASSDLSIKITGVSNSDSQHLATLTGHQGPVWQ
VAWAHPKFGSLLASCSYDGRVIIWKEGNQNEWIQAHVFSDHKSSVNSIAWAPHELGLCLA
CGSSDGNISVFTAKPNGGWDASRIDQAHPLGVTSVSWAPSTAPGALVGSGLLDPVQKLCS
GGCDNTVKVWKLYDGNWKMDCFPALQMHTDWVHDVAWAPNLGLPKSTIASASEDGRVIIW
TVAKEGDQWEGKVLNDFKTPVWRVSWSLTGNLLAVADGNNNVILWREAVDGEWQQVTTVE
P
NT seq 906 nt   +upstreamnt  +downstreamnt
atgccttcacaaaagattgaaactgggcatcaagatgtggtgcacgatttggctatggac
tactatggaaagcgtgttgccactgcctcgtcagacctttcaattaagatcactggggtg
agcaattcagactctcaacatcttgcaaccttaactggccaccaaggacctgtttggcag
gtggcctgggctcacccaaaatttgggtctttactcgcttcgtgttcttatgatgggcgt
gtaataatatggaaggagggtaatcagaatgagtggattcaagctcatgtctttagtgac
cacaagtcatctgtcaattctattgcttgggctcctcatgaactgggtctttgcctagca
tgtggctcctctgatggaaatatctcggttttcactgcaaaaccaaatggtggttgggat
gcatcaagaatcgaccaagctcacccacttggcgtaacttctgtctcatgggctccctca
actgcacccggtgctcttgttggttccggcctgcttgatcctgttcagaagctctgttct
ggtggttgtgataatactgtgaaggtgtggaagctctatgatgggaattggaagatggat
tgctttccagctcttcagatgcacacagattgggtccatgatgttgcatgggcacccaac
ttagggcttccaaaatctacaattgctagtgcctcggaagatggcagagtcattatatgg
actgtggccaaggagggggatcagtgggaaggcaaggttttgaatgattttaagactcca
gtctggagggtctcctggtcgctgacaggaaacttattggctgtggctgatggaaacaac
aacgtgatactgtggagggaagcggtggatggggagtggcaacaagtgacgacagttgag
ccatga

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