Juglans regia (English walnut): 109004959
Help
Entry
109004959 CDS
T05245
Name
(RefSeq) sm-like protein LSM1B isoform X1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
jre
Juglans regia (English walnut)
Pathway
jre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109004959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
109004959
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109004959
mRNA degradation factors
5'-3' decay
Lsm complex
109004959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
109004959
NCBI-ProteinID:
XP_018839212
UniProt:
A0A2I4G5N6
A0A833WZD8
LinkDB
All DBs
Position
12:complement(25900828..25903557)
Genome browser
AA seq
128 aa
AA seq
DB search
MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKFLGILRSFDQFANAVLEEACERVIVGDL
YCDITLGLYIIRGENVVLIGELDLEREELPPHMTRVSEAEIKRAQKAEREATDLKGSMRK
RMEFLDLD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcagggccggaagacgtctacctctcgacctctctcgccagctatcttgac
aagaaacttcttgtactgctgcgagatggtcgaaagttcttggggattcttcgttctttt
gatcaatttgccaacgccgtacttgaggaagcgtgtgagagagttatcgttggtgatctt
tattgtgacattactttgggcctatatataatccgtggagagaatgttgttttaattggg
gagttggacttggagagagaggaacttcccccacacatgactcgtgtttcagaagcagaa
attaaaagggcacagaaagcagaaagggaagctacagatcttaaagggtccatgaggaaa
agaatggaattccttgacctggattaa
DBGET
integrated database retrieval system