Juglans regia (English walnut): 109005012
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Entry
109005012 CDS
T05245
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109005012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
109005012
03110 Chaperones and folding catalysts [BR:
jre03110
]
109005012
03029 Mitochondrial biogenesis [BR:
jre03029
]
109005012
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
jre04147
]
109005012
Enzymes [BR:
jre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
109005012
Messenger RNA biogenesis [BR:
jre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
109005012
Chaperones and folding catalysts [BR:
jre03110
]
Heat shock proteins
HSP60 / Chaperonin
109005012
Mitochondrial biogenesis [BR:
jre03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
109005012
Exosome [BR:
jre04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109005012
Exosomal proteins of other body fluids (saliva and urine)
109005012
Exosomal proteins of breast cancer cells
109005012
Exosomal proteins of colorectal cancer cells
109005012
Exosomal proteins of bladder cancer cells
109005012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
ChlI
Motif
Other DBs
NCBI-GeneID:
109005012
NCBI-ProteinID:
XP_018839307
UniProt:
A0A2I4G5X7
A0A833T4W9
LinkDB
All DBs
Position
12:complement(25364866..25369983)
Genome browser
AA seq
575 aa
AA seq
DB search
MYRFSTNLASKVRVARSGSQQIGSRLSWSRNYAAKDIRFGVEARALMLKGVEELADAVKV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDEAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGISMAVDAVVTHLKSSARMISTSEEIAQVGT
ISANGEREIGELIARAMERVGKEGVITIQDGKTLYNELEVVEGMKLDRGYISPYFITNQK
NQMCELEDPLILIYEKKISSLNAVVKLLELALKRQRPLLIVAEDVESEALATLILNKLRA
GIKVCAIKAPGFGENRKAFLQDLAILTGGQLITEELGLNLEKVDFDMLGSCKKATISKDD
TVVLDGAGDKKAIEERCEQVRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
SEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELEKLETANFDQKIGVQIIQNALKT
PVYTIASNAGVEGAVVVGKLWEESDPNRGYDAAKGEYVDMVQSGIIDPVKVIRTALVDAA
SVSSLMTTTEAVVTEIPKDDKEAPAMGGGMGGMDY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgcttctccacaaaccttgcctcgaaagttcgggtcgctaggagcggcagccag
cagattggtagtagattgagttggagtaggaactatgcggccaaagacattagatttggg
gtggaggcccgtgctcttatgcttaagggtgtcgaagagctcgccgatgccgtcaaagtc
acaatgggtcctaaggggcgtaatgtggtaattgaacaaagttggggtgccccaaaagtg
acaaaagatggcgtaactgtcgcaaagagcattgaattcaaggacaaagtcaagaacatt
ggtgccagtcttgtgaaacaggttgcaaatgccaccaacgatgaagcaggggatgggacc
acctgtgctacggtccttacacgagcaatatttaccgaagggtgcaagtcagttgctgct
gggatgaacgcaatggacctaagacggggtatttccatggcagtcgatgctgttgttaca
catttgaaaagcagtgcacgaatgattagcacatctgaagaaatagcacaggttgggaca
atatctgcaaatggagagagagaaattggtgaattgattgcaagggctatggagagagtt
ggcaaagagggagtaatcacaattcaagatgggaaaacattgtataatgagttggaagtt
gttgagggcatgaagctagataggggttacatatccccttatttcattactaaccagaaa
aaccagatgtgtgaattggaagatcctctcattctaatttatgaaaagaaaatctcaagt
ttaaatgctgttgttaaattattagagctggctttgaagagacaaaggcccttactaatt
gttgccgaggatgtggaaagtgaagctttggcaactcttattctgaataaacttcgtgct
ggaatcaaggtttgtgccatcaaggcccctggttttggtgaaaataggaaagccttcttg
caggatcttgccattcttacaggaggacaacttatcaccgaggagcttggcttgaatctt
gaaaaagtggattttgatatgcttggaagttgcaaaaaggccacaatatcaaaagatgac
actgttgttcttgatggtgctggggacaagaaggccatcgaggaaagatgtgaacaggta
aggtcagcaattgaaaatagcacatctgattatgacaaagagaaattacaagagagattg
gccaagctttctgggggtgttgctgtgttgaagattggaggagccagtgaagctgaagtt
agtgagaagaaggatagagtgacagatgccttaaatgccacaaaggcagctgtagaggag
ggtatagtaccaggtggtggtgttgctcttctttatgcatcaaaagagttggaaaagctg
gaaactgccaactttgatcagaagattggtgttcagattattcagaatgctctcaagaca
cctgtgtacacgattgcttctaatgctggagttgagggggctgttgttgtcggtaagcta
tgggaagaaagtgaccctaatagaggatatgatgcagccaaaggtgaatatgttgatatg
gtccaatctggaataattgacccagtgaaagtaattaggactgctttggtcgatgcggca
agtgtgtcatctttgatgacaacaactgaagctgttgtgactgaaattccaaaggacgat
aaagaggctccggcaatgggtggcggcatgggtggcatggattattga
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