Juglans regia (English walnut): 109005045
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Entry
109005045 CDS
T05245
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre00040
Pentose and glucuronate interconversions
jre01100
Metabolic pathways
Module
jre_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109005045
Enzymes [BR:
jre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109005045
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
109005045
NCBI-ProteinID:
XP_018839358
UniProt:
A0A2I4G642
A0A833TRH5
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Position
12:complement(25010378..25013230)
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AA seq
398 aa
AA seq
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MAKYHMRSCPLLLSLLSILFYSSIVLAAPVTTYNVVSLGAKADGKTDSTQAAFISAWTKA
CASVNPAVIYVPAGRFDLGKVVFNGPCKNSAIGIRIDGTLVAPSDYSVLGNEGNWLLFEH
VDGVTISGGILDGQGTGLWDCKSSGKSCPSGATTLEFSNSKNIVLSRLTSLNSQMFHIVV
NGCQNVKMQGVEVTASGDSPNTDGIHVQLSSDVTILSSKIRTGDDCISIGPGATNLWIEN
VACGPGHGISIGSLGKDLQEVGVQNVTVKTVTFTGTQNGLRIKTWGRPSNGFARNILFQH
AIMVDVQNPILIDQNYCPDNKGCPGQVSGVKISDVTYQDIHGTSATEVAVKFDCSSKNPC
SRISLEDVKLTYKNQAAQASCTHAAGTSSGAVQPSGCL
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagtaccatatgagaagctgccctctccttctttcacttctctctatcttattc
tattcctccatcgtcttggctgctcccgtgactacttacaatgtggtcagtttgggagcc
aaagcagatggaaagacggactcaacccaggccgccttcatttctgcatggacaaaagct
tgtgcctcggtaaatccagccgtcatttacgtgccggccgggagatttgatcttggcaag
gtggttttcaacgggccatgcaagaacagtgccatcgggatacgcatcgatggcacgctc
gtggcgccatcggactacagcgttctgggaaatgaaggaaactggctgttgttcgagcac
gttgacggggttacgatatctggagggattcttgatgggcaaggcaccggcttgtgggac
tgcaagtcctcaggcaagagttgccccagcggagcaacgacactggaattttcgaactca
aaaaacatcgtgcttagtaggttgacctccctaaacagccagatgttccacatcgtcgtc
aacgggtgccagaacgtgaaaatgcaaggtgtcgaagtcaccgcctccggcgacagccca
aacaccgacggcattcacgttcagttatcatcagacgtcaccatcctcagctccaaaatc
cggaccggtgatgattgcatctcaattggccccggtgccactaacttgtggattgagaac
gttgcatgtggacctggccatggaatcagcattgggagtctgggcaaggacctgcaagag
gttggtgtgcagaacgtgacagttaaaacagttacttttaccggcactcagaatgggttg
aggattaagacttggggaaggcccagcaatgggtttgccaggaacattctcttccaacat
gccattatggtggatgtccagaatcccattctaatcgatcaaaattactgcccagacaac
aaaggttgccctggccaggtttctggtgtaaaaattagtgatgtgacataccaggacatc
catggaacatcggccacagaagtagctgtgaaatttgattgtagttcaaagaatccatgc
tccagaataagtttggaggatgtgaagctaacttacaagaatcaagccgctcaggcttca
tgtacccatgctgcaggaacatcttctggtgcagtccagccctcgggttgcttgtag
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