KEGG   Juglans regia (English walnut): 109005212
Entry
109005212         CDS       T05245                                 
Name
(RefSeq) protein RRC1-like
  KO
K12842  U2-associated protein SR140
Organism
jre  Juglans regia (English walnut)
Pathway
jre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109005212
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:jre03041]
    109005212
Spliceosome [BR:jre03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109005212
 Complex B
    109005212
SSDB
Motif
Pfam: Surp RRM_1 CID cwf21 RRM_7 CTK3 SAP
Other DBs
NCBI-GeneID: 109005212
NCBI-ProteinID: XP_018839573
UniProt: A0A2I4G6Q7 A0A833X2C4
LinkDB
Position
11:complement(36550287..36567182)
AA seq 980 aa
MSSFSITRKKTPFQKHREEEEAKKKRAEDETARLYQEFVESFQGDITPGSKAFVRGGTIN
PNEKVKADSEGEKSKDGVSVPKKGSRYVPSFIPPPLAAKGKESEKKKEDDKPKEKEKGKS
RNIDHFMEELKHEQEMRERRNQDREHWRDGRHNEHSAPSSRFDELPDDFDPSGKLPGSFD
DGDPQTTNLYVGNLSPTVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMN
RADGQAAKDEMQGVIVYEYELKIGWGKSVALPSQALPAPPPGQMAIRSKEGATVILSGPS
GPPVTSVPSQNSELVLTPNVPDITVVPPNDDHLHHVIDTMALYVLDGGCAFEQAIMERGR
GNPLFNFLFELGSKEHTYYVWRLYSFAQGDTRQRWRTEPFIMITGSGRWIPPPLPLVKSP
EHEKESGSTFAAGRSRRVEPERTLTDSQRDEFEDMLRALTLERSQIKEAMGFALDNADAA
GEIVEVLTESLTLKETPIPTKVARLMLVSDVLHNSSAPVKNASAYRTKFEATLPDIMESF
NDLFRSVTGRITAEALKERVLKVLQVWSDWFLFSDAYVNGLRATFVRLGSSGVIPFHSIS
GDTLELEKKTSSEDAGDGAKINQDAALAMGKGAAMKELMHLPLAELERRCRHNGLSLVGG
REMMVARLLSLEEAEKLRGYELDDDLKYAQSHSSTGRYSISRKGTTLEAEPVGLSGWSQY
GEDDLQSKCEESVPLAPTFPIPNPELKAFTKKEKVDPVLPASKWAREDDESDDEQKGSAR
GLGLSYSSSGSENAGDDPSKGDEMDFATGTSISAQPDNGMNEEQRQKLRRLEVALIEYRE
SLEEREIKSSDEIERKVAIRRKQLQYEYGLLDSNNDSSGNKRTSSERRDRRDDARDSSRK
RHRSQSQSESPPRKSSHRDKEREHTLDRDRDRTHDIQNERERERDREKSGSRERDDHDRD
RDRDRDRGRERDRDRRRRPK
NT seq 2943 nt   +upstreamnt  +downstreamnt
atgagctctttctccattacgcggaagaagacgccttttcagaagcatagagaggaagaa
gaggcaaagaaaaagagggcagaggatgaaactgcacgactgtaccaagagtttgtggaa
tcatttcaaggggatattacgcctgggtcgaaggcttttgttcgaggtggaacaataaac
cccaatgagaaagtgaaggctgattcagaaggtgaaaagtccaaagatggggtttctgtt
ccaaagaagggaagtaggtatgttccatctttcataccacctccactggcagctaagggg
aaagaatcggaaaagaaaaaggaggatgataagccaaaggaaaaagaaaaaggaaagtct
cgaaacatagatcatttcatggaggagctgaagcatgagcaagagatgagggagaggcga
aatcaagatcgtgaacattggcgtgacgggcgccacaatgaacattctgcgccatctagt
cgctttgatgagctgcctgatgattttgacccaagtggaaagcttcctgggtcttttgat
gacggcgatccccaaactactaatctctatgttggaaatctctcacccacggttgatgaa
aattttcttctgcggacttttggaagatttgggcccattgctagtgtgaaaataatgtgg
cctaggactgaagaggaacgaaggcggcaaagaaattgtggctttgtagctttcatgaat
agagctgatgggcaggctgcaaaggatgaaatgcaaggagtcatcgtttatgaatatgag
ttgaagattggatggggtaagtctgttgcgcttccatcgcaagctctacctgctcctcca
ccaggacagatggcgatcaggagtaaggagggtgccactgttattttatccggtccatca
ggcccaccggtcacctctgttccaagtcagaattctgaactggttcttacaccaaatgtt
cccgatataacggtggttccacccaatgatgatcatctccaccatgtgattgacacaatg
gctctctatgttctggatggaggatgtgccttcgaacaagctattatggagagaggtcgc
gggaatcctctcttcaacttcttgtttgagcttggctcaaaggaacatacatactatgtc
tggaggctctattcctttgctcagggtgatacccgtcaaagatggcgaacagaacctttt
atcatgataactggtagtggaagatggattccaccacctctgccattggtaaagagccca
gagcatgagaaggagtccggatccacatttgctgcaggaagaagcaggcgcgtggaaccg
gaaagaacacttactgattcacagagggatgagttcgaggatatgctgcgtgctttaaca
ttagagaggagtcagataaaggaagctatggggtttgccctggataatgctgatgcagct
ggagagatagtcgaagtgctgacagaatctttgacacttaaggaaactcccattccaacc
aaagttgcaaggcttatgctcgtttctgatgttcttcataatagtagtgctcctgtaaag
aatgcatctgcataccgcaccaaatttgaagcaacattacccgacattatggagagtttt
aatgatttgtttcgtagcgttactggaagaattactgcagaggcccttaaggaacgagtg
ctcaaagtcttgcaagtatggtcagactggtttttgttttcggatgcatatgttaatggt
ttgcgagctacatttgttcggcttgggagctctggtgtcatcccatttcattctatatct
ggtgatacgcttgaactagaaaaaaagactagttctgaagatgcaggtgatggagctaag
atcaaccaagatgctgcattggcaatgggcaaaggagcagcaatgaaggagctaatgcat
cttccccttgctgagctggagagacgttgcagacataacggattgtctcttgttggtggt
agagaaatgatggttgcacggttgctaagtctggaagaggcagaaaaactgaggggctat
gaactagatgatgacttgaaatatgcacagagccattcgagtactggtagatattccatt
agtcgtaaagggactactttggaagcagagccagtgggtctgtctggatggagccaatat
ggggaggacgatttgcaatcaaaatgcgaagagtctgttcctttggctccaacctttccc
attccaaaccctgaactgaaagctttcacaaagaaagagaaagttgatcctgttctgcca
gcatctaaatgggctcgagaggatgatgaaagcgatgatgaacaaaagggtagtgctagg
ggtttggggttgagctactcatcttctggaagtgagaatgctggtgacgatcctagcaag
ggtgatgagatggactttgcaactggtacaagcatctcagcacaacctgacaacggaatg
aatgaagagcagagacaaaagctgagacgtctagaggtggctttaatagaatatcgtgaa
tcccttgaagaacgggaaattaaaagttcagatgaaatcgagaggaaagttgcaatccgt
cggaaacagctgcaatatgaatatgggttattagattctaacaacgattcttcaggaaat
aagagaacatcttcagagaggagggacagacgggatgatgcccgtgactcttcaagaaag
aggcaccgcagccagagccaaagtgagagcccaccacggaaatcatcacatcgagacaag
gaaagggaacacacattagacagggatagagatagaactcatgatattcaaaacgagagg
gagagggagagggaccgtgagaagagtggaagcagagagagggatgaccatgacagggac
agggacagggacagggacaggggcagagaaagggacagggataggaggagaagaccgaag
tga

DBGET integrated database retrieval system