Juglans regia (English walnut): 109005328
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Entry
109005328 CDS
T05245
Name
(RefSeq) RNA-binding protein Y14-like
KO
K12876
RNA-binding protein 8A
Organism
jre
Juglans regia (English walnut)
Pathway
jre03013
Nucleocytoplasmic transport
jre03015
mRNA surveillance pathway
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109005328
09122 Translation
03013 Nucleocytoplasmic transport
109005328
03015 mRNA surveillance pathway
109005328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
109005328
03041 Spliceosome [BR:
jre03041
]
109005328
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109005328
Spliceosome [BR:
jre03041
]
Complex C
Other components
EJC/TREX
109005328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
109005328
NCBI-ProteinID:
XP_018839745
UniProt:
A0A2I4G780
A0A834CY18
LinkDB
All DBs
Position
5:20496473..20502138
Genome browser
AA seq
210 aa
AA seq
DB search
MASAADVEAVDFEPEDDDLMDEDGGVDTVAADATTSPMAPLPKLKSAITGAASSSAVARK
TKGRGFREDHPEAPDRSTRLAASKFDSLKSPDGPGPQRSIEGWIILVSGIHEEAQEDDLQ
NSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAQTAISSMNGAEFLTQTISVDWAF
SSGSSANGAMKRKNTRPPRERRSRSPRRRY
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcgcagcagatgtggaggctgtggacttcgagccggaggacgacgaccttatg
gacgaggacgggggcgtggacaccgtagcagccgacgccaccacctcgccaatggctcct
cttccgaagctcaagtccgctattactggcgccgcctcctcctctgcggttgccaggaag
accaagggccgtggcttccgcgaggaccatcctgaagcccccgaccgctccacccgcctt
gccgcctccaagttcgactccctcaagtcccccgacggtcctggcccccagcgatccatt
gaaggatggattattctggtcagtggaatacacgaagaggcacaagaggatgatctacaa
aattcttttggtgagtttggagagattaagaatttgcatttaaatcttgatcgccgaacc
gggtttgtcaagggatatgccctaattgagtatgagaactttgaggaagcacaaactgca
atatcctccatgaatggagcagaatttctgacacaaactatcagtgttgactgggccttc
agcagtggatcctcagctaatggagcaatgaaaagaaagaatacaaggccacctcgagaa
cgtcgctcgaggagtccgaggaggagatactag
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