Juglans regia (English walnut): 109005675
Help
Entry
109005675 CDS
T05245
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre00040
Pentose and glucuronate interconversions
jre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109005675
Enzymes [BR:
jre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109005675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109005675
NCBI-ProteinID:
XP_018840249
UniProt:
A0A2I4G8L8
A0A834CNN6
LinkDB
All DBs
Position
7:complement(18278263..18283993)
Genome browser
AA seq
448 aa
AA seq
DB search
MAASRKCVGLCSLVLVMMLFVGAMTTVRTDQIPETSNGGTEQLQSSSNNSSMVASSDIEV
EGLNEHAVDNPDEIASMVDMSIRNSTERRKLGFFSCGTGNPIDDCWRCDPNWHRNRKRLA
DCGIGFGRNAIGGRDGRFYVVTDSSDNDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIKLK
QELIMNSFKTIDARGVNVHIANGGCITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHFG
WRTMADGDAISIFGSSHVWVDHNSLSNCADGLVDAVMGSTAITISNNHFTHHNEVMLLGH
SDSYTKDTQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINS
QGNRYAAPTNPFAKEVTKRVETAQTKWKNWNWRSEGDLLLNGAYFTPSGAGASASYAKAS
SLGAKSSSMVGSITSGAGPLGCRRGHQC
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgtccaggaaatgtgtcgggctatgctcactggtgctggtaatgatgttgttc
gttggggcaatgacgacggtaaggactgaccagatcccagaaaccagcaatggagggaca
gaacaattgcagagctcaagcaacaactcgtcaatggtggcgagttcggacatagaggtg
gagggactcaacgagcatgcagtggataatccagacgagattgcttccatggtcgacatg
agcatccgcaatagcactgagagaaggaagctgggcttcttctcatgcggaaccggcaat
cccattgatgactgctggcgctgtgaccccaactggcatcgtaaccgcaagcgccttgca
gactgtggcattggatttggaagaaatgcgattggtggccgtgatggccgcttctatgtg
gtcaccgactccagcgacaatgaccctgtcaaccccaagcctggcactttgcgccatgct
gttatccaggacaagcctctctggattgtgttcaagcgtgacatggttataaaattgaag
caggagctcataatgaacagcttcaagaccattgatgcccgtggggtcaatgtccacatt
gctaatggaggatgcatcacgatccagtatattactaatgttatcattcatggtctgcac
atccatgactgcaagccaactggcaatgccatggtgaggagctccccaagtcactttggg
tggaggacaatggctgatggcgatgccatttccatttttggctcgagtcacgtatgggtt
gatcacaattccctctccaattgtgccgatggccttgttgacgctgtcatgggctcaact
gcaattaccatttccaacaaccactttacccaccacaatgaggtgatgctgttgggccat
agcgactcttacacgaaagacacgcagatgcaagtgaccattgcctacaaccattttgga
gagggacttatccagagaatgccaaggtgtagacacggatacttccatgttgtgaacaat
gactacactcactgggagatgtatgccattggtggaagtgctgaacccaccatcaatagc
cagggtaacagatatgctgcaccaaccaatccctttgcaaaagaggtgacaaagagggtg
gagacagctcaaaccaagtggaagaactggaattggagatcagaaggggatttgttgttg
aatggtgcctatttcactccatcaggagctggagcttcagccagctatgccaaggcctca
agcttgggtgccaagtcctcttctatggtcggctctataacatctggtgccggtccactt
ggctgccgcagaggccaccagtgctag
DBGET
integrated database retrieval system
