Juglans regia (English walnut): 109005730
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Entry
109005730 CDS
T05245
Name
(RefSeq) coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jre04131
]
109005730
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
jre04147
]
109005730
Membrane trafficking [BR:
jre04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
109005730
Exosome [BR:
jre04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109005730
Exosomal proteins of bladder cancer cells
109005730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
EIF3I
TPR_COPA_B
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
WD40_RFWD3
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Aa-Ago_N
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
109005730
NCBI-ProteinID:
XP_018840319
UniProt:
A0A2I4G8U2
A0A833SL71
LinkDB
All DBs
Position
16:24697095..24705220
Genome browser
AA seq
1219 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHCKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHSTLPLIVSGADDRQVKLWRMNDSKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP
EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYIKDRFLRFYEFSTQRDTQVIPIRRPG
STSLNQSPRTLSYSPTENAVLICSDVDGGSYELYFIPKDSISRGDSVQDAKKGIGGSAVF
VARNRFAVLDKSNNQVLVKNLKNEVVKKSGLPISADAVFYAGTGNLLCRAEDRVVIFDLQ
QRIVLGDLQTPFIKYVVWSHDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYVTKVSGNTIFCLDRDGKNRSIVIDATEYI
FKLSLLKKRYDHVMSMIRNSQLCGEAMIAYLQQKGFPDVALHFVKDERTRFNLAIESGNI
QIAVASATAIDEKDYWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLVTGNNEKLSK
MLKIAEVKNDVMGQFHNALYLGDVRERVKILESVGHLPLAYITASAHGLQDVAERLEAKL
GDNIPSLPEGKTTSLLIPPAPIMCSGDWPLLRVMKGIFEGGLDNVGRGTADEEDEAADGD
WGGEELDMVDVDVLQNGDVTAILEDGEVAEENEEEGGWDLEDLELPPEVDTPKASVNARS
SVFVAPTPGMPVSQIWTQRSSLAAEHAAAGNFDTAMRLLTRQLGIRNFAPLRPMFLDLHT
GSHSYIRAFSSAPVISLAVERGWSESASPNVRGPPALVFNFSQLEEKLKAGYKATTAGKF
NEALRLFISILHTIPLIVVESRREVDEVKELIIIVKEYVLGMQMELKRREIRDNPVREQE
LAAYFTHCNLQLPHSRLALLNAMTVCYKARNLATAANFARRLLETNPTIENQAKRARQVL
QAAERNMTDAAQLNYDFRNPFVICGATYVPIYRGQKDVSCPFCSSRFVPGQEGQLCTVCD
LAVVGADASGLLCSPSQIR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaagttcgagacgaagagtaatagagtaaagggactgagtttccactgcaag
aggccatggattctcgcgagtctccacagcggcgtgatccagctatgggactaccggatg
gggactctgatcgataggttcgacgagcatgacgggcctgttcgtggcgtccatttccac
aaatctcagcccctgttcgtttctggaggggatgattacaagattaaagtttggaactac
aagttgcacaggtgtctttttactcttcttggacacctagattatattcgtacagtgcag
tttcaccatgagtacccgtggattgtgagtgccagtgatgatcagactattcgtatttgg
aattggcagtcccgcacttgtatatcagtgttgactggacacaatcactatgttatgtgt
gcctcattccatcccaaagaagaccttgttgtgtcagcctccttagatcagactgttcgt
gtctgggatattggcgccctcagaaagaagacggtatcccctgcagatgacatcttacgg
ctgagtcagatgaacacagatctttttggtggtgttgatgctgttgttaagtatgtattg
gagggtcatgaccgtggggtcaactgggcagcatttcattccaccctgcctctgattgtg
tcaggagctgacgaccgccaagtgaaattatggcggatgaatgattcgaaagcttgggaa
gtggacacattgagagggcacatgaataatgtttcatgtgtcatgttccatgccaaacag
gacataattgtatccaactcagaagacaaaagtatacgtgtgtgggatgtaacaaagaga
actggcgttcaaacattccgtcgggagcacgatcgattctggattcttgcatctcaccct
gagatgaatctgctggcagcgggtcatgacagtggtatgatcgtcttcaagttggaaaga
gagcggcctgccttcgctgtgagtggtgattctctgttctatatcaaagaccgttttttg
cgattctatgagttttcaactcaacgagacacacaagtgattccaattcgacggcctggt
tccactagcttgaaccagagtccgaggactctttcttacagtccaactgaaaatgccgtt
cttatctgctcagatgttgatggcggatcttatgagttgtatttcatacccaaagatagc
atcagtaggggtgatagtgtgcaagatgcaaagaaaggcattggaggatcagctgtcttt
gtggctcggaataggtttgccgtgcttgacaagagcaacaatcaagtcttagtcaagaat
ctgaaaaatgaggtggttaaaaaaagtggcctcccaatatctgcagatgcagtattttat
gctggaacgggcaacttgctgtgtagggctgaggatagagtagttatatttgatctccaa
cagaggattgttcttggtgatcttcaaacccctttcatcaagtatgttgtttggtctcat
gacatggagagtgttgctctacttagcaagcatgccattatcattgctagcaagaagctt
gtccaccagtgcactcttcacgagacaatccgtgtaaagagtggtgcctgggatgataat
ggtgttttcatttacacgactttaaatcacattaaatactgtctgcctaatggggatagt
gggataatcagaactcttgatgtcccaatatacgttacaaaggtttctgggaataccatc
ttttgcttggatcgcgatggaaaaaacaggtctatagttattgatgcaactgaatatatt
ttcaagctttctcttttgaagaagagatatgaccatgttatgagcatgataaggaactca
cagctttgtggggaagctatgattgcatatctgcaacagaagggtttccctgatgtagct
ctccattttgtgaaagacgagagaactaggttcaatttagctattgagagtgggaacata
cagattgcagttgcgtcagctacagctattgatgagaaagactactggtatagattgggg
gtggaggctctccgccagggcaatgcaggtattgtggaatatgcctaccaaaggaccaaa
aattttgagagattgtcttttctttatctagtaactggtaataatgaaaagttgtccaag
atgctgaaaattgctgaagttaagaatgatgtcatgggtcaatttcataatgctctatac
ttgggtgatgtccgtgaacgtgttaagatcctggagagtgttgggcacttgccgcttgct
tacattacggcttcggcacatgggctacaggatgttgctgaacgtctagaagctaagttg
ggtgataatattccttctttgccggaagggaaaactacctccctcctgattccccctgcc
cccattatgtgcagtggtgattggcctcttctgagagtgatgaaaggcatatttgaaggc
ggactggataatgttggtaggggaactgcagatgaagaggatgaggccgctgatggtgat
tgggggggtgaggagctggacatggttgatgttgatgtcttgcagaatggggatgttact
gcaattttggaggatggagaggttgctgaagagaatgaggaagagggaggatgggacctt
gaggatttggagctcccccctgaagtagacactccaaaggcatctgtcaatgcccgctct
tcggtttttgtggccccgactcctggcatgcctgtaagccagatttggacccagaggtcg
tcgctggctgctgaacatgcagctgctggcaattttgatacggcaatgcggttactgacc
aggcaacttggaataagaaactttgctccattgagacccatgtttcttgatcttcacact
ggcagccattcctatatacgtgcattttcatctgctccagtgatatcactggcagttgaa
cgaggatggagtgagtctgcaagtccaaatgtgaggggtccgccagcactcgtgttcaat
ttctctcagttggaagagaagcttaaggcaggttacaaggccacaacggctggaaaattc
aacgaggctcttcggctctttattagcattctacataccattcctcttattgttgtcgag
tcaaggagggaagtcgatgaagtcaaggagttgatcattatagtgaaagagtatgttttg
ggtatgcaaatggagcttaagaggagagaaattagggacaatccagtacgtgagcaagag
cttgcagcttatttcactcactgcaaccttcaattgcctcactcaaggcttgccttgctt
aatgcaatgactgtttgttacaaggcaaggaatcttgcaacggcagctaactttgccagg
cggcttctagagaccaaccccaccattgagaaccaagcaaagagagccaggcaggtgctg
caggctgcagagagaaatatgacagatgctgctcagttgaactacgattttagaaaccca
tttgtgatttgtggagctacgtatgtgccaatttaccgaggacaaaaggatgtctcttgc
ccattctgtagttctcggtttgtgccaggccaggaagggcagctctgtaccgtctgtgat
cttgcagttgttggggcagatgcttctgggttgctctgttccccttctcagattcgatga
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integrated database retrieval system
