Juglans regia (English walnut): 109005860
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Entry
109005860 CDS
T05245
Name
(RefSeq) chloride channel protein CLC-d-like isoform X1
KO
K05016
chloride channel 7
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
jre01009
]
109005860
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jre04131
]
109005860
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
jre04040
]
109005860
Protein phosphatases and associated proteins [BR:
jre01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109005860
Membrane trafficking [BR:
jre04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
109005860
Ion channels [BR:
jre04040
]
Chloride channels
Chloride channel (CLC)
109005860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
109005860
NCBI-ProteinID:
XP_018840475
UniProt:
A0A2I4G9B8
A0A833WZ56
LinkDB
All DBs
Position
12:22202374..22213762
Genome browser
AA seq
798 aa
AA seq
DB search
MLSNHLQNGIETAKMVWSRIPNAEEGDHEDAGLLRKSDGSSVESLEYEVVENHAYWEEQD
QRGKLFLVYYVVVKWFFALLIGIGTGLAAVFINLSVENFAGWKFALTFSIIQKSYVAGFI
VYVLINLVLVLSSVYIITHFAPAAAGSGIPEIKGYLNGVDIHGVLLFRTLIGKIFGSIGS
VGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLSSRWLQIFKSDRDRRDLVTCGCAAGV
AAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGNCGHFGSGG
FIIWDISGGQEDYSFEELLPMAVIGVIGGLLGALFNQLTLYISYWRRNHLHKKGNRVKII
EACLVSLITSIISFGLPLLRKCSPCPDSDPDSGLECPRPPGMYGNYVNFYCSKEKEYNDL
ATIFFNTQDDAIRNLFSAKTIHEFSAQSLLTFLVMFYTLAVVTFGTAVPAGQFVPGIMIG
STYGRLVGMFVVNFYKKLSIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLPL
IMLVLLISKAVGDAFNEGLYEEQARLRGIPLLESKPKYQMRKMTAKEACGQRVVSFPRVV
KVADIVSILRSNKHNGFPVIDHTRIGETLVIGLMPRSHLLVLLQSKVDFQLSPLPSDPRP
GSRPIRHTPSEFVKPASSKGISIEDIHLSSDDLEMYIDLAPFLNPSPYIVPEDMSLTKVY
NLFRQLGLRHIFVVPRPSRVIGLITRKDLLIEDSEESDTVELQSTSVRSRHRDRSMLRNG
DAESPLLNVLLVQGHTSS
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgctctccaatcacctgcaaaatgggatcgagaccgcgaagatggtttggtctcggatc
ccgaacgccgaggaaggtgaccacgaggacgccgggctcttgcggaagagcgatgggagc
agcgtcgagagccttgagtacgaagtcgtcgagaatcacgcttattgggaagagcaggac
cagcgagggaagctttttctcgtatattatgtggtggtgaagtggttctttgctttgctc
attggcattggtactggattagctgccgttttcataaatctttctgttgagaactttgct
ggttggaagtttgcattgactttctctataatacaaaaatcatatgtggctgggtttatc
gtctatgtattaatcaacctagttttagtcttgtcctctgtatatatcattacgcatttc
gcaccagctgcagctggatctggaattcccgaaatcaaaggttatttgaacggagttgac
attcacggggttcttcttttcagaaccttgattggaaagatatttggaagcattggctca
gttggaggtggtctagctctgggcaaagaaggtcctcttgttcatactggtgcttgtatt
gcttctttgcttggacaaggtggatccaccaagtatcatctaagttcgagatggttgcaa
atttttaagagtgatcgagatcgccgtgatcttgttacatgtgggtgtgcagctggagtt
gctgctgcttttagggctccagttggtggtgtattatttgcattggaagaggttacatct
tggtggaggagtcaactcatgtggcgtgtctttttcacttctgctattgtggctgtcgtg
gtgcgtactgcaatggggtggtgtaagagtggaaactgtggacattttggctccggtggc
ttcattatatgggacatatcaggtggtcaagaggactactcttttgaggagttgctgcca
atggctgttatcggagttattggaggtctactgggagcattgtttaatcagcttactctt
tatatatcttattggcgccgaaatcatttacacaagaaagggaaccgagtcaagataatt
gaagcatgccttgtctccctgataacctccattatttcctttggattaccacttctaaga
aaatgcagtccatgccctgattcagatcctgattccggtttagaatgcccaaggcctccc
ggaatgtatgggaattatgtaaatttttattgcagcaaggaaaaggaatacaatgacctt
gctactattttcttcaatactcaggatgacgccataaggaatttgttcagtgcaaaaacc
attcatgagttcagtgcccaaagtttgttgacctttttggttatgttttataccttagct
gtggtgacatttggtactgctgttccagctggtcaatttgttcctggaataatgatagga
tcaacatatgggcgtctagtcggcatgtttgttgttaacttttacaagaagctcagcatc
gaagagggaacatatgctttactgggagctgcttcttttcttggagggtcaatgaggatg
acggtgtctctatgcgtcattatggttgagataacaaataacttgaagcttttacccctt
atcatgcttgttcttcttatttcaaaggctgttggtgatgcttttaatgaaggcctatat
gaagaacaagcacgacttaggggcattccattgctggaatcaaaacccaaatatcagatg
cggaaaatgacagcgaaggaggcttgcggacaacgggtggtgtccttccctcgcgttgtt
aaggttgcagatatagtttctattttacggagcaacaaacataatggtttccctgtgatc
gatcacacaaggattggggaaacacttgtcattggacttatgcctcgcagtcatttgttg
gtacttctgcagtcaaaagtagatttccaacttagtcctttgcccagtgatcctagacct
ggatccaggccgatcaggcacactcctagtgaatttgtcaaacctgcttccagtaaagga
atatctatagaggatatacatcttagttcagatgacttggaaatgtacattgatcttgcc
ccatttttgaatccatctccatacattgtccctgaagatatgtctctgacaaaggtatat
aatctttttcgccaactaggtttgagacatatatttgttgtccctcggccatctcgtgtg
attggtttgattacccgaaaggatttgttgattgaggatagcgaggaatcagatacagtg
gagctccaatcgactagtgtaagatctcggcatcgtgatagaagcatgttgaggaatgga
gatgcagaaagcccacttctcaatgttcttcttgtccaaggtcatacatccagctga
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