Juglans regia (English walnut): 109006170
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Entry
109006170 CDS
T05245
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
jre
Juglans regia (English walnut)
Pathway
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109006170
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
jre01009
]
109006170
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
109006170
Protein phosphatases and associated proteins [BR:
jre01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109006170
Spliceosome [BR:
jre03041
]
Common components
Common spliceosomal components
SR proteins
109006170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_DEAH11
RRM_5
Motif
Other DBs
NCBI-GeneID:
109006170
NCBI-ProteinID:
XP_035549431
UniProt:
A0A6P9EQ11
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All DBs
Position
8:complement(23406593..23410240)
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AA seq
240 aa
AA seq
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MADSPRRRYSRSPSPLRARSRSQSRSRPRSRSRSWSRPRSRSRSRSWSRPRPRSRSRSRG
RSRSRSRGRAEPVNPGDTLYVTGLSQRVTERDLEEHFSKEGKVASCFLVMEPRTRVSRGF
AFVTMETVEDANRCVKYLNQSVLEGRYITVEKSRRKRARTPTPGHYLGLKSTRDFGHRGG
DRGRYRGRDEYRRSPRRSPFRGGRDYSPRHSPHGGRSRRERSRSLPYSPSPERRYVRGSR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggccgattcaccgcgcagaaggtattcacggtccccttcccctttgagagctcgatcc
aggtcccaatctaggtctagacccagatcaaggtccaggtcctggtctagacctaggtct
aggtccagatctagatcctggtctaggccaaggcccagatcccggtccagaagtcgtggc
agatcaaggtctagaagtcgtggcagggctgagcctgtaaaccctggagatacgctttat
gtaactggcctcagccaaagggtcacagaaagggatcttgaagagcacttctctaaggag
ggaaaggtagcatcctgttttcttgtgatggagcctcggacacgtgtctctcggggtttt
gcttttgttacaatggaaactgttgaggatgccaaccgttgtgtgaaatatcttaaccaa
tcagttcttgaaggtcgatatattactgttgagaagtctcggagaaaacgagcaagaacg
cctacaccaggacattatcttgggctcaaaagtactagagactttggtcatcgtggtggt
gatcgtggtagatatcgtggacgtgatgaatatcgaagatctccaaggcgctcaccattt
cgagggggtcgcgattattctccaagacactcgccccatggtggaaggtcaaggagggag
aggtccaggtcacttccttactctcctagcccagaaaggaggtacgttcgtggttctagg
tga
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