Juglans regia (English walnut): 109006295
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Entry
109006295 CDS
T05245
Name
(RefSeq) protein argonaute PNH1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
109006295
03036 Chromosome and associated proteins [BR:
jre03036
]
109006295
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109006295
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109006295
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
109006295
microRNA pathway
RISC loading complex
109006295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoMid
ArgoL2
CFAP107
Motif
Other DBs
NCBI-GeneID:
109006295
NCBI-ProteinID:
XP_018841071
UniProt:
A0A2I4GB07
LinkDB
All DBs
Position
1:39968117..39985612
Genome browser
AA seq
934 aa
AA seq
DB search
MQMKDPVENTLIFRKPLQNSMNQKTSTQMVHKNEDFLEHKKKIMARRKGRRRGRLPKVER
LQESELDLDVGSLASCKNLMLHRRPGFGQLGTKCLVKANHFLAEIPGSDICQYTVKIKPE
ITSSKLNRAIMTQLVKLYRETDLGMRLPVYDGGRNLYTAGLLPFASKDFTIVLNDDYKGT
GNGREQQFKVTVSFVALASMHQLRELLAGKSVDTPQEALTIIDIVLRQLPGQRYVSVGRF
LYSPDIKKPQQLGGGLESWRGFYQSIRPTQMGLSLNIDMSSAAFIEPLPVIDFVAQILDK
DVFSRPFSDADRVKVKKALRGVKVEVTHRGNVRRKYRISGLSSQPTRELIFPVDEQRNMK
SVVEYFQEMYGYVIRYPHLPCLQVGNQKKVKYLPMEACKIVSGQRYTKGLSEKQITSLLK
VSCQRPQEQEVDILQTVHQNDYDQDPYAKEFGIIIDSKLASVEARVLPAPWLKYNDSGKE
TEYLPQVGQWNMMNKKVVNGSTIRYWACINFSRTVQESSARGFCQQLVRMCKISGMEFNM
DPVIPIYSARPDQVKKALKYVYGSATSKLEGKELELLIAILPDNNGSLYGELKRICETEL
GLISQCCLTKHVFKSSRQYLANLSLKINVKMGGRNTVLLDALRWRIPLVSDIPTIIFGAD
VTHPENGEDSYPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKTWKDPQHGTVTG
GMIRELLLSFKNATGQKPLRIIFYRDGISEGQFYQVLLYELDAIRKACASLEPGYQPPVT
FIVVQKRHHTRLLASNHNDRSSTDTSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSR
PAHYHVLWDENNFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPEV
HDHSKTRSPQTTNGSFVRPLPALKDKVKKVMFYC
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgaaagaccctgtggagaacactctgatattcaggaaaccactacagaactct
atgaatcagaagacatcaacccagatggtgcacaaaaatgaagatttcttggaacataaa
aagaagatcatggcaaggaggaagggaaggagaagaggtagattaccgaaagtcgagagg
ttgcaagaatcagagcttgatttagatgtggggtcccttgcttcatgcaaaaaccttatg
ttacaccgcaggcctggatttggccagctgggaacaaagtgtttagttaaagccaatcac
ttccttgcagagataccagggtcagatatatgtcaatatactgtgaaaataaagcccgag
attacttcttcgaaattgaacagagccatcatgacacagttggtgaaactttatagagag
actgacttagggatgaggctccctgtttatgatggaggaagaaacctttacacggccgga
ttgctaccttttgcctcaaaagactttaccatagtattgaacgatgattacaaggggaca
ggcaatggaagggaacaacaatttaaggtgacagtcagttttgtagcactagccagtatg
caccaattgcgtgagcttcttgcagggaaatcagttgatacccctcaagaggcgcttacc
attattgatattgtcttgcggcaactgccaggccaaaggtatgtatcagttggaaggttt
ctatattctcctgatattaagaaaccgcagcagcttggcggtggcttagaatcatggaga
ggtttctaccagagtattagacctactcagatgggactatccctgaatattgacatgtca
tctgctgcattcattgagccactcccagtcattgattttgttgctcagattttggataaa
gatgtgttttcaaggccattttcagatgcagatcgtgtaaaggtcaagaaagcccttaga
ggggtcaaagttgaagttacacacagaggaaatgttagaaggaaatatcgaatttcagga
ttgtcatcacagcctacacgggagctaattttcccagtagatgagcaaaggaacatgaaa
tctgttgttgagtactttcaagagatgtatggatatgtcattcggtatccccacctacct
tgtcttcaagtgggaaaccagaagaaggtgaagtacttgccaatggaggcatgcaagatt
gttagcgggcagagatacacgaaagggctgagtgagaaacagattacttctctgctaaaa
gtttcatgccaaagaccccaggaacaagaagtggacatcttacagacagttcaccaaaat
gactatgatcaggatccctatgcaaaggagtttggcatcattatagacagcaagcttgca
tctgttgaggctcgggttcttccagctccatggctcaagtataatgatagtggaaaggaa
acagaatacttgcctcaagttggtcaatggaatatgatgaacaagaaagtcgtaaatgga
agcaccatcagatattgggcttgtatcaacttctcacgaactgtccaagagagctctgct
cgtggtttttgtcaacagttggttcgaatgtgcaaaatctctggcatggaatttaacatg
gaccctgtgattcctatatattcagccagaccagatcaggtaaagaaggccttgaaatac
gtttatggttctgctacaagcaagcttgaaggaaaagagttggagttgcttatcgccatt
cttccggacaacaacggttctttgtatggtgaactgaaacgaatctgcgaaacagagcta
gggttgatttcgcagtgctgccttacaaaacatgtcttcaagagtagcagacagtacctg
gcaaatctctctcttaaaatcaatgtcaagatgggaggaaggaatacagtgcttctagat
gctttacgttggaggattcctttagttagcgacattccaacaatcatttttggagctgat
gttactcatccagaaaatggagaagattcttatccatctatagctgctgttgtggcctcc
caagattggccagaagttacaaagtatgccggtttggtatgtgcacagcctcatcgagaa
gaacttattcaagacttattcaaaacctggaaagatcctcaacatggtacggttactgga
ggcatgatcagagagcttctactttcttttaagaatgctactggacagaaaccattgagg
atcatattttacagggatggtatcagcgagggacagttctaccaagtcttactatatgaa
cttgatgccattcgtaaggcttgtgcttcattagaacctggttaccaacctccggtaaca
tttattgtggttcaaaagcggcaccacactagactccttgcaagtaatcacaacgataga
agtagcaccgacacgagtggaaatatcttacccggtactgtggtggattcaaaaatctgc
catccaactgagttcgacttttatttatgtagtcatgctggaatccagggcactagtcga
cctgctcattatcatgttctctgggatgagaacaattttactgcagatgaaatccaatct
ctgaccaacaacctgtgctatacgtatgctcgatgcactcgatctgtttctgtagtgcct
cctgcatattatgcacatctggcggcctacagagctcgattctacatggaacctgaggtg
catgatcattctaaaacacgttccccacagacaacaaatgggtcatttgtccgtcccctg
ccagctttgaaagacaaggtgaagaaggtgatgttttactgctag
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