Juglans regia (English walnut): 109006820
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Entry
109006820 CDS
T05245
Name
(RefSeq) E3 ubiquitin-protein ligase ATL6
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jre04121
]
109006820
Enzymes [BR:
jre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109006820
Ubiquitin system [BR:
jre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
109006820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
Prok-RING_1
zf-Nse
Arc
RINGv
ODV-E18
zinc_ribbon_16
Prok-RING_4
zf_RING_Vps8
Zn_ribbon_IFT122_C
PHD_NSD
DUF1272
PHD
zf-RING_6
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
109006820
NCBI-ProteinID:
XP_018841768
UniProt:
A0A834CSL8
A0A2I4GCY5
LinkDB
All DBs
Position
8:complement(29191319..29193217)
Genome browser
AA seq
376 aa
AA seq
DB search
MTFFTRRSLIPCTGKYGTVTVFLLALLSPNIPWAAAQTNTDQDTYGRYARFSPSMAIIVV
VLVAALFFMGFFSIYIRNCNSGQSGNSIRAGILSRRGATAARGLDPEVIETFPTLVYSVV
KGLKIGKGALECAVCLNEFAEDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLVPQ
PGDSVHPFPELDTDSDLEAQNEVAVESSNAETEQAQRVPEETEVIDVKQTLNRNRTRGSR
SSRWSTRMFPFPRSHSTGHSLIQPGENTERFTLRLPMEVRKQIMNPKLNRATSMVFLPRE
GSSRRGYRTGGEGSSRGKSHRRMEKPDQLSKSERWAFFTRAWSMKSPKVAANNDGEGTSS
QPAGEGSVNDSVRPHV
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcttcacgcgacgaagcttaattccttgcaccggtaagtatggaaccgttacc
gtctttttgctcgctctcctctccccgaatattccttgggcggcggcccagaccaatacg
gaccaggacacctacggccggtacgccaggttcagtccctccatggcgataatcgttgtc
gttcttgttgcggctctattcttcatgggattcttctccatctacatccgcaactgcaac
agcggccagtccggcaacagtatccgtgctggtattctctcgaggcggggcgccacagcc
gcgcgtgggctcgacccggaggtgatcgagacgttccctaccctggtctattccgtcgtc
aaggggctcaagatcgggaaaggcgccctggagtgcgccgtgtgcttgaacgagttcgcg
gaggacgagacgctacgtctgatcccgaagtgcgaccacgtgttccacccggagtgcatc
gacgcctggttggcttcccacacaacctgtcccgtctgccgagcaaacctcgtccctcaa
cctggagattcagtacaccctttccccgagttggacaccgactctgacctcgaagcccaa
aacgaagtcgccgtcgaatcatcaaacgcagaaacagaacaagcacaaagagtacccgaa
gaaacggaagttatagacgtaaagcaaacgctgaatcggaatcggacccgggggtcaagg
tcgagccgttggtccacccggatgttcccgtttccacgttcacactcgacgggtcactcg
ttgatccaaccgggagagaacacggaacggttcacgttgaggttgccgatggaggtgagg
aaacagataatgaacccgaaactgaaccgggccacgagtatggtgttcttgccaagggaa
gggagttcgaggcgaggatacagaacaggtggggaagggagtagcagagggaagagtcac
agaaggatggagaaaccggaccagctgagtaaatcggagcggtgggcgttttttacgaga
gcatggtcgatgaagtcaccgaaggtggcggctaataatgatggagagggcacctcatct
caaccggcgggcgagggatcagtgaatgactcggttcgaccccatgtataa
DBGET
integrated database retrieval system