KEGG   Juglans regia (English walnut): 109007082
Entry
109007082         CDS       T05245                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
jre  Juglans regia (English walnut)
Pathway
jre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109007082
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:jre03041]
    109007082
Spliceosome [BR:jre03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    109007082
 Complex B
    109007082
 Complex C
   U2 SnRNP specific factors
    109007082
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 109007082
NCBI-ProteinID: XP_018842158
UniProt: A0A2I4GE29
LinkDB
Position
13:3454216..3458065
AA seq 812 aa
MLGSLPILPLPAPPSDGNLGPLPASQVSDVEMDERPSNEEQNKANSAPATVATHTRTIGI
IHPPPDIRTIVDKTAQFVAKNGPEFEKRIIANNAGNVKFNFLNGSDPYHAYYQHRLSEFR
AQNQSSAQQPSLLPADSAAPEPVPSAPAADGNEAAAAKVDLSAQFMPIRKAVEPPEAEQY
TVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSL
ADAYSKVLMPPKGLTEKLKKSVPDMTTVLERCMNRLEWERSQEQARQKAEDEKEQERIEM
AMIDWHDFVVVETIDFVDDEDEDLPPPMTLEEVIRRSKVSVAEEDIVEPGKEVEMEMDEE
EVQLVEEGMRAASLEENDDGKKNDMKITEEPEPPMRIVKNWKRPEDRIPAERDPTKFVVS
PITGELILINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPD
IFGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRTANQAMSQNMVGEDQNDAANN
DARNLPGPAAPPPRPGMPSVRPLPPPPGLALNLPRMPPNTVQYSAPSSVGLPVPPPRQPV
MPMVPSVRPPPPPMSMASGQQSLLVNQPPPMPPSMSMHAPSMHVPPPPGSQFTPMPVPRS
YVPLPVPPPTMPMMPPPPLPHGMPPPPPPEEAPPPLPDEPEPKRQKHDDSLLIPEDQFLA
QHPGPVRITISVPNVDEGNLKGQILEITVQSLSETVGSLKEKIAGDIQLPANKQKLSGKP
GFLKDNMSLAYYNVGAGEMLALSLRERGGRKR
NT seq 2439 nt   +upstreamnt  +downstreamnt
atgctaggttctttgccaatcttgcccctccctgctcctccttccgatggaaatcttggc
ccgcttcccgcatctcaagtgtctgatgtggaaatggatgaaaggccatctaacgaggag
cagaataaagctaattcggctcctgcaacggttgcaactcatacgagaactattggaatt
attcatcctcctccagacatcagaaccattgttgacaaaactgcccagtttgttgctaag
aatggaccagagtttgaaaagaggattattgcaaataatgctggaaatgtgaagttcaat
ttcttgaacggatcagatccctaccatgcatattatcaacatcgtctgtctgaatttcgt
gctcagaatcagtcttctgcgcagcagccttctttgctacctgctgattctgctgcgcct
gagccggtcccatctgctccagccgctgatgggaacgaagcagcagcagcaaaggtggat
ctgtctgcccagtttatgcccatacgcaaagctgttgagcccccagaagctgagcagtat
actgttcggcttcctgaaggaattactggagaagaactggatataattaagctcacggca
cagtttgtggctcgaaatgggaagtcattcttgacaggattgacaagcagggaaatcaat
aatccacagtttcatttcttgaagcctactcacagtatgttcatgtttttcacttcgctt
gccgatgcatattcaaaagtcttgatgcctcccaagggtttgacagagaagctaaagaag
agtgtccctgacatgacgactgtgcttgaacgatgcatgaatcggcttgagtgggagagg
tcacaagagcaggctaggcagaaagctgaggatgaaaaggagcaggaaagaatagagatg
gctatgattgattggcatgattttgttgtggtggaaacaatagactttgtggatgatgag
gatgaggacttacctcctccaatgacccttgaagaggttataagaagaagtaaggtgtca
gttgcggaagaagatattgttgagccaggaaaggaggtggaaatggaaatggatgaagaa
gaagttcagcttgttgaagagggcatgagggcagctagtcttgaagagaacgatgatgga
aagaagaatgacatgaagataacagaagaacctgaaccaccaatgagaattgtgaagaac
tggaagagacctgaggataggatccctgcagaaagagacccaacaaaatttgttgtttct
ccaattactggtgagttaatcctcattaacgagatgtccgaacacatgaggatttccctc
attgatcccaagtacaaagagcagaaagaaaggatgtttgctaagattcgggaaactaca
cttgctcaggacgatgaaatctccaggaacattgtgggacttgcccgaacccgtccagat
atttttggtaccacagaggaagaagtctctaatgctgtcaaggctgagattgagaagaag
aaggacgagcaaccgaaacaggtcatatgggatggtcacactggaagcattggacgcacc
gcaaaccaggccatgtcgcagaacatggtcggagaggatcaaaatgacgctgccaataat
gacgccagaaaccttcctggtcctgcagctcctcctcctagacctggtatgccatccgtt
cgtccacttcctccaccacctggactagccttgaaccttcctcgtatgcctccaaacaca
gtccagtattctgccccatctagtgttgggctccctgtacccccacccaggcaaccagtc
atgcctatggttccttctgttaggccgccgccacctccaatgtcaatggcttctggacag
caatctcttttggttaatcaaccacccccaatgccaccatcaatgtctatgcatgctcct
agtatgcatgtaccacctccacctggttctcagtttacgcctatgccagttccccgaagt
tatgttcctcttcctgtacccccacctaccatgcctatgatgcctccaccaccgttgcct
catggaatgcctccaccaccaccaccagaggaagctcctccaccgcttccagatgaacca
gagccaaagaggcagaagcacgatgattctttgcttatcccagaagaccagtttcttgct
cagcatccggggcccgtccgtatcaccatatctgttccgaatgttgatgaaggaaatctc
aaagggcagattctggagatcacagtgcagtcattatctgaaactgttggcagtctgaag
gagaaaattgcaggggacatccaacttcctgccaataagcaaaaattgagtgggaaacct
ggctttctcaaggacaatatgtctctggcatattacaatgtcggagcaggagaaatgctt
gccctttctctaagagagcggggtggtagaaaaagataa

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