Juglans regia (English walnut): 109007234
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Entry
109007234 CDS
T05245
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jre04121
]
109007234
Ubiquitin system [BR:
jre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109007234
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_SPT8
MIOS_WD40
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_WDR11_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_2nd
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
109007234
NCBI-ProteinID:
XP_018842370
UniProt:
A0A2I4GEQ7
A0A833Y6V6
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Position
1:complement(3612237..3616755)
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AA seq
511 aa
AA seq
DB search
MESSSPRSFFRKIRSRELSGFRVRKRPYISDAASDIIEIGAVTVEHCGDETPPLAISFCE
NIKNSHILAVSDEDGYVSLFDTRRKFSCSASHQENAEKAKVCDWVAHHNAVFDVRWIKED
AQILTASGDQTVKVWDVQEMKCIAELMGHTGSVKSICSHPTNPDIVVSGSRDGSFALWDL
RCNSNSRSVHGELCLGSTAVVKGAHLPPRAKRIRRGKAASMSITSVLYLKDEVSIATAGA
VDSVLKFWDSRNLKSVVTQTCPHPQSTEKERRLHGISSLSQDLNGVFLSASCMDNRIYLY
NLLQLEKGPLRSFSGCRIESFYVKSAISPDATHIISGSSDGNAYIWQVNKPHGDPVALKS
HDGEVTAVDWCPFEDGQIATCSDDFTVRMWNTQNSICSSTGSPPSSNRRRVMAIPSVECR
KLMVNEPSCPKEDPDSWSPSNDVLHQNNSSYTIIMPKISTPEAQKKRFFSGSDLNEAFEK
TPEATVKSPSSVLNPPSSTKRTIRDYFHAAS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggagagctcaagcccccgatcattctttcggaagatcagatccagagagctaagcgga
ttcagagtccgaaagcgaccgtatattagcgacgccgcatcggatataatcgaaattgga
gctgtgactgttgaacactgcggcgatgagactccgccgttggccatctcattctgcgag
aatattaagaattcgcacatccttgccgtgtccgatgaagacgggtacgtgagcttgttc
gacactcgccgcaagttctcttgctccgcatctcaccaagaaaacgcagagaaagccaag
gtttgcgactgggtcgcgcatcacaatgccgtgttcgatgtacgttggattaaggaagac
gctcaaattctgacggcttctggtgatcaaaccgtgaaggtatgggatgtccaggaaatg
aaatgcattgcagagttgatggggcacactggaagtgtaaagtctatatgttctcatcca
accaatcctgatattgttgtctccggttcaagagatgggtcctttgctctgtgggacttg
agatgtaattctaattccagaagtgttcacggggagctttgcttaggttcgactgctgtg
gttaaaggagcacatcttccccctcgagcaaaacggattaggcggggcaaggcagcttcc
atgagcattacatcggttctttatctcaaagatgaggtttcaattgctaccgcgggagca
gtggacagcgttttgaagttctgggatagcagaaatttgaaaagtgtggtaacacagaca
tgccctcatccccagtcaaccgaaaaggaaagaagattacatggtatatctagcttgtcc
caagatttgaatggggtgtttctttcagcctcatgcatggacaatagaatatacttgtac
aatttacttcagcttgaaaagggacctttgagatctttctctggatgccggatagaatcg
ttttatgtaaagtcggcaatcagccctgatgcgactcacataatcagtggttctagtgat
ggaaatgcctatatttggcaggtgaacaaaccgcatggggatcccgttgcattgaaaagc
catgatggagaagtcacagcagtagattggtgtcctttcgaggatgggcagatagcaact
tgttcagatgatttcacggttcgcatgtggaacacccagaacagtatttgctcgagcaca
ggatcccccccatcttccaatcgaaggagagtaatggcaatccctagtgtggaatgtaga
aagcttatggtaaatgaaccaagttgtcctaaagaggatccagacagttggtctccttcc
aatgatgtattacaccaaaataactcatcctacacaatcatcatgcccaaaatcagcact
cctgaggcccagaagaaaagatttttctctggttctgatttaaatgaggcatttgagaaa
acccctgaagctacagtgaagagcccatcttctgtcttgaacccgccttcctctacaaaa
cgaacaatccgagattactttcatgcggcttcataa
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