KEGG   Juglans regia (English walnut): 109007234
Entry
109007234         CDS       T05245                                 
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
jre  Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:jre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:jre04121]
    109007234
Ubiquitin system [BR:jre04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     109007234
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_EML WD40_MABP1-WDR62_2nd EIF3I Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_DCAF12 Beta-prop_SPT8 MIOS_WD40 Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_WDR11_1st Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_WDR75_2nd WD_LRWD1
Other DBs
NCBI-GeneID: 109007234
NCBI-ProteinID: XP_018842370
UniProt: A0A2I4GEQ7 A0A833Y6V6
LinkDB
Position
1:complement(3612237..3616755)
AA seq 511 aa
MESSSPRSFFRKIRSRELSGFRVRKRPYISDAASDIIEIGAVTVEHCGDETPPLAISFCE
NIKNSHILAVSDEDGYVSLFDTRRKFSCSASHQENAEKAKVCDWVAHHNAVFDVRWIKED
AQILTASGDQTVKVWDVQEMKCIAELMGHTGSVKSICSHPTNPDIVVSGSRDGSFALWDL
RCNSNSRSVHGELCLGSTAVVKGAHLPPRAKRIRRGKAASMSITSVLYLKDEVSIATAGA
VDSVLKFWDSRNLKSVVTQTCPHPQSTEKERRLHGISSLSQDLNGVFLSASCMDNRIYLY
NLLQLEKGPLRSFSGCRIESFYVKSAISPDATHIISGSSDGNAYIWQVNKPHGDPVALKS
HDGEVTAVDWCPFEDGQIATCSDDFTVRMWNTQNSICSSTGSPPSSNRRRVMAIPSVECR
KLMVNEPSCPKEDPDSWSPSNDVLHQNNSSYTIIMPKISTPEAQKKRFFSGSDLNEAFEK
TPEATVKSPSSVLNPPSSTKRTIRDYFHAAS
NT seq 1536 nt   +upstreamnt  +downstreamnt
atggagagctcaagcccccgatcattctttcggaagatcagatccagagagctaagcgga
ttcagagtccgaaagcgaccgtatattagcgacgccgcatcggatataatcgaaattgga
gctgtgactgttgaacactgcggcgatgagactccgccgttggccatctcattctgcgag
aatattaagaattcgcacatccttgccgtgtccgatgaagacgggtacgtgagcttgttc
gacactcgccgcaagttctcttgctccgcatctcaccaagaaaacgcagagaaagccaag
gtttgcgactgggtcgcgcatcacaatgccgtgttcgatgtacgttggattaaggaagac
gctcaaattctgacggcttctggtgatcaaaccgtgaaggtatgggatgtccaggaaatg
aaatgcattgcagagttgatggggcacactggaagtgtaaagtctatatgttctcatcca
accaatcctgatattgttgtctccggttcaagagatgggtcctttgctctgtgggacttg
agatgtaattctaattccagaagtgttcacggggagctttgcttaggttcgactgctgtg
gttaaaggagcacatcttccccctcgagcaaaacggattaggcggggcaaggcagcttcc
atgagcattacatcggttctttatctcaaagatgaggtttcaattgctaccgcgggagca
gtggacagcgttttgaagttctgggatagcagaaatttgaaaagtgtggtaacacagaca
tgccctcatccccagtcaaccgaaaaggaaagaagattacatggtatatctagcttgtcc
caagatttgaatggggtgtttctttcagcctcatgcatggacaatagaatatacttgtac
aatttacttcagcttgaaaagggacctttgagatctttctctggatgccggatagaatcg
ttttatgtaaagtcggcaatcagccctgatgcgactcacataatcagtggttctagtgat
ggaaatgcctatatttggcaggtgaacaaaccgcatggggatcccgttgcattgaaaagc
catgatggagaagtcacagcagtagattggtgtcctttcgaggatgggcagatagcaact
tgttcagatgatttcacggttcgcatgtggaacacccagaacagtatttgctcgagcaca
ggatcccccccatcttccaatcgaaggagagtaatggcaatccctagtgtggaatgtaga
aagcttatggtaaatgaaccaagttgtcctaaagaggatccagacagttggtctccttcc
aatgatgtattacaccaaaataactcatcctacacaatcatcatgcccaaaatcagcact
cctgaggcccagaagaaaagatttttctctggttctgatttaaatgaggcatttgagaaa
acccctgaagctacagtgaagagcccatcttctgtcttgaacccgccttcctctacaaaa
cgaacaatccgagattactttcatgcggcttcataa

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