Juglans regia (English walnut): 109007347
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Entry
109007347 CDS
T05245
Name
(RefSeq) protein SMG7
KO
K14409
protein SMG7
Organism
jre
Juglans regia (English walnut)
Pathway
jre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109007347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
109007347
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
109007347
mRNA cycle factors
Common to processing body (P body) and stress granule
109007347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
109007347
NCBI-ProteinID:
XP_035545888
UniProt:
A0A6P9EPR7
LinkDB
All DBs
Position
5:19747910..19756839
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AA seq
986 aa
AA seq
DB search
MMIEQMDKMSTPTSREHAQRLYEKNVELENRRRRSAQARIPSDPNAWQQMRENYEAIILE
DHVFSEQHSIEYALWQLHYRRIEELRQHFSATLATAGSNTSQGVKGPARPDRIAKIRMQF
KAFLSEATGFYHDLILKIRAKYGLPLGYFSEDSDNRIVMEKDGKKSTEMRKGLISCHRCL
IYLGDLARYKGLYGEGDSKSREYAAASSYYLQASSLWPSSGNPHHQLAILASYSGDELLT
VYRYFRSLAVDSPFSTARDNLIVAFEKNRQTYSQLSEDVKASAIKESPVRLTGKGKGKGD
VKLASKDTNSEGSQVKDGASTGPETYKSFCVRFVRLNGILFTRTSLETFAEVLSLVSSGL
CELLTSGPQEELNFGADALENGLLIVRLISILIFTVHNVRKEAEGQSYSEIVQRAVLLQN
AFTAVFELMGHILERCVQLHDPSSSYLLPGILVFVEWLACCPDVATGSDADEKQETVRSR
FWNNCISFLNKLLSNKAMSIDDDEDETCFNNTSRYEEEETENRLALWEDLELRGFLPLLP
AQTILDFSRKHSFGVDGNKEKVARVRRILAAGKHLANVVRVDQEPMRFDSKVKKFIIGVE
PQTTNGCMFTTTYGAMPPTNSMMYEKKLEKTKNLGIPQQNPELEGEEEDEVIVFKPTVSE
RRSDAIGLEWAPYEGLNPDLNVSTNDMKFLGSSVSAPLGNLRQQIALDSGSQVPLSVANM
VPQHPQPIQSYASKWSVEEESVLSNGLKGLRFPENGHLMKSEHQDNGIFTPVHSASIQQA
VSANNGSMSYGHTKAPEPFISKIDAFPLSGVMSDNLAVKTSSASVAGTRRSPVGRPIRHL
GPPPGFNPVRPKQVNELVSGSDLVSEIPVMDDYSWLDGYQLPSSRKGSGSNSSINYPSYS
NAQHINISNGSSGTVNFPFPGKQLPIMPFSVENQKGWQEYQTLEQLNLHHEQQLQQQHNP
INGNQQFTRLPEQYQGQSIWTGRYFV
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgatgattgaacagatggataaaatgtccactccaacatctagggagcatgcccaacgt
ctttatgagaagaatgtggaattggaaaataggcgtcgaaggtcagcccaggcacgcatc
ccatcagatccgaatgcttggcaacagatgcgtgagaattatgaagcaataattcttgag
gatcatgttttctctgagcagcacagcattgaatatgctctttggcagttacactacagg
agaattgaggaattgagacaacactttagtgctactttagcaactgcaggctcaaacaca
tctcagggtgtgaaaggccctgctcgacctgatcgaattgcaaaaataagaatgcaattc
aaagctttcctttcagaagcaactggcttttaccacgatcttattttgaaaatccgagct
aagtatggccttcctctgggttatttctctgaggattcagacaaccgaattgttatggag
aaagatgggaagaaatctactgaaatgagaaaaggtctgatatcttgtcaccgttgcttg
atatatttgggtgaccttgcacgttataaaggactatatggggagggtgactctaaaagt
cgggagtatgctgcagcttcaagttactatttgcaagcttcatctctgtggccatcaagt
gggaatccccatcatcagcttgctatattggcttcctattcgggggacgagctattgaca
gtttatcgatattttcggagtctggcagtggatagtcccttctcaacagcaagggataac
ttgatcgttgcatttgagaagaatcgtcagacttactctcaactatccgaggatgtcaaa
gcttctgcgatcaaggaatctcctgtgcggttgactggcaagggaaaagggaaaggggat
gtgaaacttgcatcaaaagatacaaactcagaaggcagccaagtaaaggacggagcatcc
actgggcctgagacatataaatccttttgcgttcggtttgttcgtctaaatggaattctt
ttcacacgcacaagcctggagacatttgcagaagttctctctttggttagcagtggttta
tgtgaacttctgacttctgggccacaagaagagctgaattttggtgctgatgctcttgag
aatggacttctcattgttagacttatctccattcttatattcacagttcataatgtaaga
aaggaggctgaaggtcaatcatattcggaaattgtacagcgtgctgttctacttcagaat
gcatttactgctgtttttgagttgatgggacacattctagagagatgtgtgcagctgcat
gatccttcttcaagttacctcttacctggcattctggtatttgtagaatggctggcgtgt
tgtccagatgttgcaacaggcagtgatgcagacgaaaaacaggaaactgttagatcaaga
ttttggaacaattgcatatctttcttgaataagctcttgtcaaataaggcgatgtccatt
gatgatgatgaagatgagacttgttttaataacacaagcaggtatgaagaagaggaaact
gaaaatcggcttgctttgtgggaggacttggagttaagaggattcttgccactacttccc
gcacaaacaattttggatttttcgaggaagcattcctttggagttgatggcaataaggaa
aaagtagcccgtgttagaaggatcctagctgcagggaagcatcttgcaaatgtggttaga
gttgatcaagaaccaatgcgttttgattcgaaggttaagaaatttattatcggtgttgag
cctcaaaccacaaatggttgcatgtttactaccacctatggggccatgcctcctacaaat
agtatgatgtatgaaaagaagttggagaaaacaaagaatctgggcattccgcagcaaaat
cctgaattagaaggggaagaggaggatgaggtaatagtttttaagcctacagtgtctgag
aggcggtctgatgcgattggtctggaatgggccccgtatgagggcctgaatcctgatcta
aatgtttctacaaatgatatgaagtttcttggcagttctgtttcagcccctctagggaat
cttcggcagcagattgctcttgattcgggttcacaagttcctctatctgttgctaatatg
gtcccccagcatcctcaaccaattcaatcttatgcttcaaagtggtcagtggaagaggaa
tccgttctttctaacggcttgaaaggtctaaggtttccggagaatggacatctaatgaaa
tctgagcaccaggacaatggcatattcactcctgtccattcagcttccatccagcaagct
gtcagtgccaataatggcagtatgtcttacggtcatacaaaagctccagaacctttcata
tctaagattgatgcttttccgttgtctggggtgatgtcggacaatttggctgtgaaaaca
tcatcagcttcagttgctggtacaagaagaagtccagttggtcggcctattaggcacctt
gggcccccacctggttttaaccctgttcgccctaaacaagtgaatgaacttgtttctggg
tcagatttggtgagtgagataccagtaatggatgattatagctggttggatgggtatcag
ttgccatcatcaaggaaaggctctgggtcaaatagttccatcaattacccatcttattct
aatgcccagcacatcaatatcagcaatggctcgagtgggactgtcaactttccatttcct
ggaaaacaacttccaattatgcctttctcagtggaaaaccaaaagggctggcaagaatac
cagacccttgaacagctaaatctgcaccatgaacagcagttgcagcaacagcataacccc
atcaatggaaatcagcaattcactcggctgcctgagcaatatcaaggacagtccatctgg
acaggtcgttacttcgtgtga
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