Juglans regia (English walnut): 109007497
Help
Entry
109007497 CDS
T05245
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
jre
Juglans regia (English walnut)
Pathway
jre04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
109007497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jre04131
]
109007497
03029 Mitochondrial biogenesis [BR:
jre03029
]
109007497
Membrane trafficking [BR:
jre04131
]
Autophagy
Autophagosome formation proteins
ULK complex
109007497
Atg1 complex
109007497
Mitochondrial biogenesis [BR:
jre03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
109007497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
109007497
NCBI-ProteinID:
XP_018842720
UniProt:
A0A2I4GFQ1
A0A833TJ31
LinkDB
All DBs
Position
16:complement(5796295..5801772)
Genome browser
AA seq
612 aa
AA seq
DB search
MFWLRDMDLQSNPQPELGKLEQIAYKFLLKSLHIILDSRVPSLHPHDRSGDLSSASRVRK
SDKWFNLVLGDRPAALDNLSFWHRNLMDPMIIDVILVREGSNLVGVFAETVIERWVVQYE
YPRVVAAQTGENSALYKKTYKRSIILLRALYTHMRLLPAYKIFRQLSTSSQTYNFDIIYK
VSSFSDPFSRADGEMMEEYSFTPVEAFPGRLCISVTYRSTLTEFKLEPSTLLPPRIITDY
VGSPDTDPLRSFPPSVKGVHGISFPLRPVRAPSSVPLQRPHSWTSGFHRATFSAQNQPIV
GSPPAYRPSAVPYDYSSPPADMYGNRAQHYRMPIHQRAISYDDYQLSPPFSPSPSPSSPS
YISSGNPMHTLMRPETAPVSIPFPMTGRSSRFLSPNSFDPNRSSLPPLSPRSRKTEPSSQ
ESPCGTASFRKIEALRSGEMQSYYAGQKMIRDSRDDSGRFSGLLSSSGSPRIGFSRSSSR
LSFQDDLDDNDFSCPFDVDDVDTLDFDASQTLDGKKASEFTSQSLPIGRKSQDAAVGVLV
HTLRTAPPLRQDPSCYSSHSMKIELEGGVTSASGFFMPRKTADALEELRSYREMKDLLLS
KSGTMVFSKDET
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgttttggctgagagatatggatttgcaaagtaatcctcagcccgaattgggaaaactg
gaacaaatcgcttacaaattcctattaaagagtttacacatcattctggactcgagggtt
ccttctcttcatccacatgatcgtagtggggacctgtcatcggcttctcgggtgagaaaa
agtgacaaatggttcaacttagttctaggtgaccgccctgcagctctggacaacttgagt
ttctggcacagaaatctgatggatccaatgataattgatgtgatacttgttcgtgaaggg
tctaatttagtgggagtatttgctgagactgttattgagaggtgggttgttcagtatgaa
tatccacgagttgtggctgctcaaactggtgaaaattctgccttgtacaagaaaacatac
aagaggtcgataatacttttacgggctctttatacacatatgaggcttctcccagcatat
aagatatttcggcagctgagtacatcaagccagacttataatttcgatatcatttacaag
gtgtcttcatttagtgatcccttctcaagggcggatggggaaatgatggaggaatacagt
ttcactcctgtagaggccttccctggccgcctttgcatatctgtgacttaccgttctaca
ctgactgagttcaaacttgagccttcaaccttattgccaccgaggattattacagattat
gttggtagccccgacactgacccactgaggtcttttcccccttcagtgaagggtgttcac
ggtatttcttttccattgagaccagtacgagctccatcttcggtgccacttcaacgccca
cacagctggacaagtggcttccacagagcaactttttctgcacagaatcaacctattgtt
ggatctccacctgcatatcgcccatctgctgtgccatatgattattcatctccacctgcg
gatatgtatggtaacagagctcaacactatagaatgccaatccatcagagggccatcagc
tatgatgattatcagctttcacccccattctctccatctccatccccatcttctccatcg
tacatctccagtggtaatcctatgcacacacttatgcgcccagaaactgctcctgtaagt
ataccatttccaatgacaggcaggagttctagattcctttctcccaattcttttgatcca
aatagaagttcccttccacctttatctccaagaagcagaaagactgagccttcatcacag
gagtctccatgtggaactgcatcttttaggaaaatagaggctttaaggtctggagagatg
cagagttattatgctggccagaagatgatcagagatagcagagatgattcggggcggttc
tcagggttactatcttccagtggctcaccccgtattggattttctagaagctcaagcaga
ttatctttccaggatgacttggatgataatgacttttcatgtccttttgatgttgatgat
gttgacacattggattttgatgccagtcaaactcttgatgggaaaaaagcttccgagttt
acttcacagtcattgccaattggtagaaaatcacaagatgctgctgttggcgttctcgtt
cacacgctgagaacagcacctcctcttcgccaagatccaagttgttactcatcccactca
atgaagattgaacttgagggaggagttacttcagcttctggattctttatgcctcgaaag
acagctgatgcccttgaagagctcaggagttacagagaaatgaaagacctacttctgtct
aagagtggaactatggtgtttagcaaagatgaaacttga
DBGET
integrated database retrieval system
