KEGG   Juglans regia (English walnut): 109007725
Entry
109007725         CDS       T05245                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
jre  Juglans regia (English walnut)
Pathway
jre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109007725
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:jre03041]
    109007725
Spliceosome [BR:jre03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109007725
 Complex B
    109007725
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 109007725
NCBI-ProteinID: XP_018843069
UniProt: A0A2I4GGP6 A0A833UCP9
LinkDB
Position
11:27063775..27070210
AA seq 276 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNVCDNLADHMIGNVYVQFKEED
QAASALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGREL
RRKLFGRFRGYRISRSRSRSLSPRHRRGHRDYRDRDRDYGGNVKRLSKDRYDRDGGGGGR
RRHASPRRSRSPVPGREGSEERRARIEQWNREREEQ
NT seq 831 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcttcgatcttcggtaccgaaaaggaccgggtcaactgccccttc
tacttcaagatcggtgcttgtcgccacggcgatcgctgctctcgcctccacaatcgcccc
acgatatctccgacactcctcctgtcgaacatgtaccagcgcccggacatgatcaccccg
ggcgtggacgcccagggtcagcccatcgacccgcgcaagatccaggagcacttcgaagac
ttttacgaggacatcttcgaggagctcagcaagttcggcgagatcgagagcctcaacgtc
tgcgacaacctcgccgaccacatgatcggcaatgtctacgttcagttcaaggaggaggac
caggccgcatccgccttgcaggcccttcagggacgtttctactcgggccgccccatcatc
gccgatttttctccggtcaccgatttccgcgaggccacgtgtcggcagttcgaggagaac
agttgtaaccgaggcgggtactgcaacttcatgcacgtgaagctgattggaagagagcta
aggaggaagctttttggaaggttccgtgggtataggattagccggagtcgtagcaggagt
ttgagcccccgtcataggcgagggcatagggactatagggaccgggatcgtgattatgga
gggaatgtgaagcgactgagcaaggacaggtatgacagggacggtggtggtggtggaagg
agaaggcatgctagcccgaggcggagcaggagccccgtacccgggagggaaggtagtgag
gagcggcgagctagaattgaacagtggaatcgagaaagggaggagcagtaa

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