Juglans regia (English walnut): 109007859
Help
Entry
109007859 CDS
T05245
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
109007859
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
109007859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
DUF5996
Motif
Other DBs
NCBI-GeneID:
109007859
NCBI-ProteinID:
XP_018843272
UniProt:
A0A2I4GHA0
A0A833TS01
LinkDB
All DBs
Position
12:complement(27042951..27058000)
Genome browser
AA seq
734 aa
AA seq
DB search
MASYRPFPPQTSFAPAPIQNPLPPPQPQPPPPLHPPHQRAQYNQNWGGYGGGGGGGGGAD
GSISSVPPPPSSSYPQNYNTSQMHPNSNYHHQHYVPPRGQQPPPPPPHQQYPYPPPPPPP
ESSYPPPPPPPAPSMAQNSMNVQPPQAPIYYPSNQYSQYSHPPIQPMRPPPPPPPPSSPP
SSSIPPPPPPSSPPPPPSAPLQNKVGGVDRGSHERDKGSSKELTASGRHGLLNLVVPAKQ
QQKPPVPPVPVKKSNGPPGRVETDEERRLRKKREFEKQKQEEKQRQQLKESQNTVLQKTQ
MLSSAKVHGSIVGSRMGDRRATPLLSGERVENRLKKPTTFLCKLKFRNELPDPSAQPKLM
AMKNEKDQYTKYTITSLEKTYKPKLFVEPDLGIPLDLLDLSVYNPPSARPPLAPEDEELL
HDDVAVTPVKNNGIRRKERPTDKGVAWLVKTQYISPLSMESTKQSLTEKQTKDLREMKGG
RNILENLNNRERQIKEIESSFVACKSHPVHATNKDLYPLEVLPLLPDFDRYDDQFVVAAF
DSAPTADAEVHGKLDQTVRDAYESQAIMKSYVATGSDTDKSFLAYMVPSPDELSKNIYDE
REDISYSWVREYHYDFRLDDVDDPTTYLVSFDEAEARYVPLPTKLVLRKKRAKEGRSSDE
VEYFPVPSRVTVRRRSAVAAVELRDSEVYSNSKGSFSNSKRGGLDIEDGLGRPQKVARHQ
DIDQSSGAEDEMSD
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgtacaggccctttcctccgcaaacttcattcgcgcccgccccgattcagaac
ccccttccaccaccacaaccacaacctccgccgccgctacatccacctcaccagcgagct
cagtacaatcagaattggggtggatatggtggtggtggtggtggtggtggtggtgctgat
gggtctatatcctcggttcctcctccaccatcttcttcatatccccaaaactacaacacc
agccaaatgcacccgaattcgaattaccaccaccaacattacgttccgccgaggggtcaa
caacctccaccacctcctcctcaccagcagtatccgtatccgccaccaccgccccctccg
gagtcatcttacccaccaccaccaccaccacccgctccttctatggcacaaaactcgatg
aatgtgcagcccccacaagctcctatttattatccgtctaatcagtacagtcagtatagt
catccgccaatacagccaatgcgaccaccgcctccaccaccacctccatcttcaccccca
agttcatcaattccaccaccaccacccccaagttcaccaccgcctcctccatcggctcct
ctgcagaacaaggtgggtggagtagatagggggtctcatgagcgtgataaagggtcttcc
aaggagctaacggcttctggaaggcatgggcttttaaaccttgttgttcctgctaaacag
cagcagaagcccccggtgcctcctgtgccagtgaagaaatctaatgggccacctgggagg
gtggaaacggacgaagagaggaggttgaggaagaagagggagtttgaaaagcaaaaacag
gaagagaaacaaaggcagcagttgaaggagtcccagaacacggttctacaaaagactcag
atgttgtcttctgcaaaggtgcatgggtcgattgtggggtcacggatgggggataggaga
gctactccattgttgagtggtgagagggttgagaatagattgaagaagccaacaacattc
ttgtgcaagttgaaattccgcaacgagctcccagatcctagtgcacaaccaaagctcatg
gctatgaagaatgagaaagatcaatatacaaaatacacgatcacatctttggagaaaact
tacaagcccaaactttttgtcgagccagatctggggatacctcttgaccttcttgacctc
agtgtatacaatcctcctagtgctagaccaccccttgctccagaagacgaggaattgttg
catgatgatgtagcagtgacccctgtaaagaataatggcattagacgaaaagaaaggcct
actgataaaggtgttgcctggctggtgaaaacacagtatatatctcctcttagcatggaa
tcaacaaagcagtctttaactgagaaacaaacaaaagacctgagagaaatgaagggaggc
cgtaacattttggagaaccttaacaatagggaaagacaaatcaaggaaatagaatcctca
tttgtggcatgcaagtcgcaccctgttcatgcaactaacaaagatttatatcctttagag
gttctgcctttgttgcctgattttgatcggtatgacgaccaatttgttgttgcggccttt
gatagtgctcctacagctgatgcagaagtccatggcaagctggatcaaactgttcgtgat
gcctatgaatcacaggccattatgaaaagttatgtggcaacgggctctgatacggacaaa
tcgtttttggcatacatggtcccttctccggatgagctatccaaaaatatttatgatgaa
cgtgaagacatctcatactcttgggttcgcgagtaccattatgattttcgtctggatgat
gtggatgaccccacaacataccttgtttcatttgatgaagcagaagcacgctatgtgcct
cttccaacaaaattagttttaagaaaaaagagggccaaagaaggaagatctagtgatgag
gtcgaatattttcctgtaccttccagagttactgtaaggcggagatcagctgttgctgca
gtcgaactgagggattcagaggtttattcaaattcgaaggggagtttttcaaattctaag
aggggagggttagacattgaagatggccttggaagaccacagaaggttgcccggcatcag
gacattgatcaatctagtggagctgaagatgaaatgtctgattga
DBGET
integrated database retrieval system
