Juglans regia (English walnut): 109007921
Help
Entry
109007921 CDS
T05245
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
jre
Juglans regia (English walnut)
Pathway
jre03082
ATP-dependent chromatin remodeling
jre03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109007921
03083 Polycomb repressive complex
109007921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jre03036
]
109007921
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
109007921
Histone modification proteins
HAT complexes
HATB complex
109007921
HDAC complexes
Sin3A-HDAC complex
109007921
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
109007921
PRC2.2
109007921
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
109007921
Heterochromatin formation proteins
Other heterochromatin formation proteins
109007921
Chromatin remodeling factors
NuRD complex
109007921
NuRF complex
109007921
NuRF complex (fruit fly)
109007921
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
CAF1C_H4-bd
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
WD40_Gbeta
WDR55
Beta-prop_EML
DSE1_N
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
DNAI3_WD
Beta-prop_WDR36-Utp21_1st
eIF2A
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
109007921
NCBI-ProteinID:
XP_018843375
UniProt:
A0A833TRU9
A0A2I4GHJ4
LinkDB
All DBs
Position
12:26458937..26465393
Genome browser
AA seq
467 aa
AA seq
DB search
MKDRGKDTEPSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLY
LSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRE
LPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTE
PFVLSGGKDKSVVLWSIHDHISTLAADTGTTKSPGSGGTNSKHASKVGGSADKPIDSPSI
GPRGIYQGHNDTVEDVQFCPSSAQEFCSVGDDSCLILWDARVGSTPVVKVEKAHGADIHC
VDWNPHDVNFILTGSADATVHMFDRRNLTSGDVGSPVHKFEGHNAAVLCVQWSPDKSSVF
GSSAEDGILNIWDHEKVGKKHDSIGSKMPNFPPGLFFRHAGHRDKVVDFHWNASDPWTIV
SVSDDCESTGGGGTLQIWRMIDLIYRPEEEVLAELDKFKSHILTCSS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacagaggtaaagacactgaaccatcggtggatgagaggtacacacagtggaag
tccctagtgccggtgctctacgactggctcgccaaccacaacctcgtctggccttctctt
tcttgccgatggggtccgcaactagagcaagccacttacaagaatcgtcaacgtctttac
ctttctgaacagactgatggcagtgttccaaatactcttgtcatagcaaactgtgaggtt
gttaaacctagagttgcagctgcagagcacatatcacagttcaatgaggaagcacgttct
ccctttgtgaagaagtacaaaactattatacaccctggcgaggtgaacagaatcagggaa
ctcccacagaatagtaagatcgtggccacacacactgacagtcctgatgttctaatttgg
gatgttgaggctcaaccaaatcgtcatgctgttctgggagctacaaattctcgtccagat
ctgatattgactgggcatcaagataatgctgaatttgctctggctatgtgccctactgaa
ccctttgtgctttctggaggcaaggacaagtctgttgttttgtggagcatccatgatcat
atttctactttagcagcagacacaggaactacaaagtctccagggtcaggtggcaccaat
agtaaacatgcctctaaggttggtgggagtgcagataaacccattgacagcccttctatt
ggtccaagaggtatctaccaagggcacaacgatactgtagaagatgtgcagttctgccca
tcaagtgcacaggagttctgtagtgtaggtgacgattcttgtctcatactatgggatgcc
agagtgggatctactccagttgtcaaggttgagaaagctcatggtgctgatatacattgt
gttgattggaatcctcatgatgtaaatttcatcctgacagggtctgctgatgctactgtt
cacatgtttgatcgccgtaatctcacttctggagatgttggatcacctgttcataaattt
gaaggtcacaatgctgctgtcctctgtgtacagtggtctccagacaagtcatcggtcttt
ggaagttctgctgaggatggcattctgaacatctgggatcatgagaaggttggtaaaaag
catgactctataggatcaaaaatgccaaattttcctcccggcttattcttccgacatgct
gggcatagggacaaggttgttgacttccattggaatgcatctgatccatggactattgtc
agtgtgtctgatgattgtgaaagtactggaggtggtggcacactacagatatggcggatg
atagatttgatatacaggcccgaggaagaggttctggctgagctggataaattcaagtct
cacatcttaacatgttcctcatga
DBGET
integrated database retrieval system
