Juglans regia (English walnut): 109008091
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Entry
109008091 CDS
T05245
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like isoform X1
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
jre
Juglans regia (English walnut)
Pathway
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109008091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
109008091
Spliceosome [BR:
jre03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
109008091
Complex B
109008091
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
DUF4523
RRM_YTH1
xRRM
DUF1866
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
109008091
NCBI-ProteinID:
XP_018843609
UniProt:
A0A2I4GI84
A0A833UW94
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All DBs
Position
8:11133980..11136399
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AA seq
244 aa
AA seq
DB search
MAEATTGTEVPPNVTIYINNLNEKIKLEELKKSLLAVFSQFGKILEVLAFKTLKHKGQAW
VVFEDVSSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKGDGTFVPRERRKRHDDKGKK
KKEQHDANQAGMGLNPAYAGAYGATPALSQLPYPGSGKPMLPEGPAPPNNILFVQNLPHE
TTPMMLQMLFYQYTGFKEVRMVETKPGIAFVEYGDEMQSTAAMQALQGFKITQQNPMLIT
YAKK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggctactacgggcactgaggtccctcccaacgtgactatatacatcaacaat
ctcaacgagaaaatcaagcttgaagagttgaagaagtcgctgctcgctgtgttctcgcag
ttcgggaagatactggaagtgctggcgttcaagacactgaagcacaaaggtcaagcgtgg
gtggtcttcgaggacgtctcctccgcctccaatgcccttcgccaaatgcagggcttccct
ttctacgacaagcccatgagaatacaatatgcaaagacaaaatcagatataattgccaag
ggtgatggtactttcgttccacgggaaagacgtaagaggcatgacgataagggaaagaag
aagaaagagcaacatgatgctaatcaagctggaatgggtttgaatcctgcttatgccggt
gcttacggtgcaacacctgctctctctcagctaccttatccgggcagtggaaagcctatg
ctaccagagggacctgctccaccaaataacattctgttcgtgcagaatcttccacatgag
acaactcccatgatgcttcaaatgctcttctaccaatatactggttttaaggaagttaga
atggtggaaacaaagccagggattgcctttgtggagtatggagatgagatgcaatcaacg
gcagcaatgcaggcactccaaggtttcaagataacccaacagaaccctatgttgatcacc
tatgcaaagaaatag
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