Juglans regia (English walnut): 109008276
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Entry
109008276 CDS
T05245
Name
(RefSeq) transcription initiation factor IIF subunit beta-like
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109008276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
109008276
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
109008276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
UBR1-like_wing
Motif
Other DBs
NCBI-GeneID:
109008276
NCBI-ProteinID:
XP_018843842
UniProt:
A0A833UN74
A0A2I4GIX2
LinkDB
All DBs
Position
8:complement(6498109..6502167)
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AA seq
263 aa
AA seq
DB search
MMDEAHGHSIGSSSSNVDTAKAERSVWLMKCPVVVAKSWQSHPHSDPHPLAKVVLSLDPL
RHDDSSSLQFTMEMAGTEAGSIPKSYSLNMFKDFVPMCIFSETNQGKVAMEGKVEHKFDM
KPHGENIEEYGRLCRERTSKSMIKNRQIRVIDNDRGVHMRPMPGMVGLISSTSKDKKKTA
PVKQSDVKRTRRDRGELEDIMFKLFERQSNWALKQLVQETDQPAQFLKEILNELCVYNKR
GTNQGTYELKPEYKKAVEDTTAE
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgaagcgcatggtcatagtattggtagtagcagtagtaacgtggatacagcg
aaggccgagagatcggtttggctcatgaagtgcccggtggtggttgccaagtcgtggcag
agtcatccccactctgatccccaccctctcgccaaggtcgtcctctccctcgatcctctc
cgccacgatgattcctcttccctccagttcacaatggagatggctggtaccgaggcaggg
agtattccaaaaagttattctttgaatatgtttaaagattttgttcctatgtgtatcttt
tccgagacaaatcaaggtaaggttgcaatggaaggaaaggtagagcataagtttgacatg
aaaccccatggtgaaaacattgaagagtatggaagattgtgccgtgaaaggacaagcaag
tccatgataaagaatagacaaatacgggtcattgacaatgatcgcggagtacatatgagg
cccatgcctggaatggttggcttgatttcatccacttccaaggataagaagaaaactgca
ccagttaagcagtcagacgtaaaaagaactagaagggatcgtggggagctggaggatata
atgttcaaactatttgaaagacaatcaaattgggccttgaagcagctcgtccaagagacc
gatcaacctgcacaattcttgaaggagatactcaacgagctgtgtgtgtacaataaaagg
ggaactaaccaaggaacttacgagcttaagccagaatataagaaagctgttgaagataca
actgctgaataa
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