Juglans regia (English walnut): 109008302
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Entry
109008302 CDS
T05245
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 3, chloroplastic
Organism
jre
Juglans regia (English walnut)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
AAA_30
zf-CCHC
CMS1
YgbB
AAA_19
ERCC3_RAD25_C
zf-CCHC_4
SBF_like
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
109008302
NCBI-ProteinID:
XP_018843890
UniProt:
A0A2I4GJ12
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Position
12:88760..99206
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AA seq
764 aa
AA seq
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MASFIGVSSIYRTPTLELYRRKATLTTTPLLLLPLSDKSHLNNVPKAYNTSQKPFSFESG
GTLRSGFKQQSLGLVPSAIATPNSSVLSEEAFKGLSGGSPEDSLDDYYDSEVEPSSAASV
SEEEVTISKLGLPQSLVDTLESRGITHLFPIQRAVLVPALESRDLIARAKTGTGKTLAFG
IPIIKRLYEDDKQRGSQRRSGRLPRVLVLAPTRELAKQVEKEIKESAPYLNTVCVYGGVS
YVTQQNALSRGVDVVVGTPGRIIDLIKGNSLKLGEVQYLVLDEADRMLAVGFEEDVEVIL
EKLPPARQSMLFSATMPGWIKKLTRKYLNDPLTIDLVGDQDEKLAEGIKLYAITATATSK
RTILSDLITVYAKGGKTIVFTQTKRDADEVSMALTNSIPSEALHGDISQHQRERTLNGFR
QGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSS
QRRTVRSLERDVGCKFEFVGPPSIKEVLESSAEQVVAALTGVHAKSIEFFTPTAQKLIEE
QGISALAAALAQLSGFSQPPSSRSLISHEQGWVTLQLTQHPPYSSRYLSARYVTGLLSDI
YPAAADQVGKIHLIADERVQGAVFDLPEEIANELLNRQTPPGNTISKITKLPALQDDGPP
SDYYGRFSSRDRNNGRGSRDRRSLRGSRGWDSGQNSDSDDGFFRSGNRSYRTDNSWSRFS
KSSGDDWLIGGRQSRTRDRGFGGSCFNCGRSGHKASECPNKKSY
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttcataggcgtttcgtccatttacagaactccaacactcgagctttataga
aggaaggcaacattaacaacaacgcctttgcttttgttacccttatcggacaagtctcac
ctcaataatgttccgaaagcctacaacaccagccaaaagcccttctctttcgaatccggc
ggtacacttaggagtggcttcaagcagcagagccttggtttggttccgtccgcgattgcc
acccccaattcttcggtcctaagtgaagaagcattcaaaggcctcagtggtggttcccca
gaagactctctggatgactattatgactctgaggtggaaccatcttctgctgcctctgtg
agtgaggaagaagtcaccatttccaaattgggtttacctcagagtctcgtcgataccctc
gagagccgtgggattactcaccttttccccattcaaagagctgttttagtcccagcactg
gaaagtcgagatctcattgctcgtgccaagactgggactgggaagacgctagcctttggg
atcccaattattaaacgcctttacgaagatgacaaacaaagagggtctcagaggcggtct
ggtcgtcttcctagagttttggttcttgcacctacacgggagctagcaaagcaagtggaa
aaagagattaaagagtctgcaccttatttaaatactgtatgtgtttatggaggtgtttct
tatgtcacacagcagaatgcgctttcccgtggagttgatgtagttgttgggactcctggt
cgaataatcgacctgataaaaggtaacagcctcaaactgggggaagttcaatatttggtc
cttgatgaagctgatcggatgcttgcggttggctttgaggaggatgtggaagtaattttg
gaaaagcttccacctgcgcgtcagagcatgctcttttctgcaactatgcctggttggata
aagaaactgacacggaaatatttgaatgacccgttgacaattgatttggttggcgatcaa
gatgaaaagctcgctgaagggataaagctttatgctataacagccactgcaacttcgaag
cgcaccattcttagtgaccttataacagtatatgcaaagggtgggaagaccattgttttc
acacagactaaacgtgatgccgatgaagtctcgatggcattaacaaatagcattccttcc
gaagcattgcatggagatatatctcaacatcagagggaaagaacattaaatggatttcga
caagggaaattcacagtgcttgtcgccactgatgttgcatcccgtggacttgatatccca
aatgttgacctagttattcactacgaacttcccaatgatccagagactttcgtgcatcgt
tctggtcgtactggacgtgcaggaaaagaaggtactgccattctcatgtttactagtagc
cagaggagaacagtgagatcccttgagcgtgatgtgggatgcaagtttgagtttgttggc
ccaccatctatcaaagaggttctggagtcatctgctgagcaagtagttgctgctctaact
ggagttcatgccaagtctatagagtttttcacgccaactgcacaaaaattgattgaagaa
cagggaataagtgctcttgcagctgcactagcacaattgagtggattctcccaacctcct
tcatcccggtctctaatcagtcatgagcagggatgggttacattgcaattgactcaacat
ccaccttattctagtagatacctgtctgctagatatgtcactgggcttctttctgacatt
taccctgcagctgctgatcaagttggaaaaatacatctaattgctgatgaaagggttcaa
ggagctgtttttgatcttccagaggagattgcaaacgagttgctgaataggcaaacacca
cctggaaacactatttccaagattaccaagttgcctgccttgcaagatgatggccctccg
agtgattattatggcaggttttctagcagggatcggaataacggacgtggatctagggat
cggagaagtcttagaggctcaaggggttgggacagtggtcaaaattctgacagtgatgat
ggattttttaggagtggtaatcggagttatagaactgataacagctggtcgcggttttca
aagagcagtggggatgattggctgattggaggtagacagtcaagaaccagggacagaggc
tttggaggttcctgttttaattgtggacggtctgggcacaaggcatcagaatgcccaaac
aagaaaagctattag
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