KEGG   Juglans regia (English walnut): 109008307
Entry
109008307         CDS       T05245                                 
Name
(RefSeq) flap endonuclease 1 isoform X1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
jre  Juglans regia (English walnut)
Pathway
jre03030  DNA replication
jre03410  Base excision repair
jre03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109008307
   03410 Base excision repair
    109008307
   03450 Non-homologous end-joining
    109008307
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:jre03032]
    109008307
   03400 DNA repair and recombination proteins [BR:jre03400]
    109008307
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:jre04147]
    109008307
DNA replication proteins [BR:jre03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    109008307
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     109008307
DNA repair and recombination proteins [BR:jre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     109008307
Exosome [BR:jre04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109008307
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5 HHH_2 PM2_P3
Other DBs
NCBI-GeneID: 109008307
NCBI-ProteinID: XP_018843895
UniProt: A0A833UGI1 A0A2I4GJ17
LinkDB
Position
12:complement(192715..204464)
AA seq 415 aa
MGIKGLTKLLADNAPKAMKEQKFESYFGRKVAIDASMSIYQFLIVVGRIGTEMLTNEAGE
VTSHLQGMFTRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKRADASQDLAEAVETGN
KEDIEKFSKRTVKVTKQHNEDCKRLLRLMGVPVIEAPSEAEAQCAALCKSGKVYAVASED
MDSLTFGAPRFLRHLMDPSSRKVPVMEFEVAKTLEELNLTMDQFIDLCILSGCDYCDSIR
GIGGQTALKLIRQHGSIENILENINKERFHIPDDWPYQEARQLFKEPVVYTDEEQLEIKW
TAPDEEGLITFLVNENGFNSDRVTKAIEKIKAAKNKSAQGRLESFFKPVANPPAPIKRKE
SKCVLRSPRPAIGHKMFSLHASRSRLMVHASLSLPIPDLGVKNSTSLSTGVIFRA
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgggtataaagggtttaacgaagctcttggcggacaatgccccaaaggccatgaaggag
cagaaattcgagagctattttggccgcaaagtcgctatcgacgccagcatgagcatttat
cagttcctcattgttgtgggaagaattgggactgagatgctgaccaatgaggctggtgaa
gttactagtcatctgcaaggcatgtttacgcggacaataagacttctggaagctggaata
aagccggtctatgtttttgatgggaagcctccagatctgaaaaaacaagagctggcaaaa
cgttactcgaagagggccgatgctagccaggatttggcagaagccgtggagactgggaat
aaggaagatattgagaaattcagtaaacgtacagtgaaggtgacaaagcagcacaatgag
gactgcaaaagactgttaagactcatgggagtgcctgtaattgaggctccttcagaagca
gaggcacaatgtgctgcactttgcaaatcaggaaaggtttatgctgtggcttcagaagac
atggactccctaacatttggagctccccggttccttcgccatttgatggatcctagctca
agaaaagtcccagtaatggaatttgaagttgcaaagaccttggaggaactaaatcttact
atggatcaattcattgatttatgcattctttctggatgtgattactgtgacagcattcga
ggaattggagggcagactgctttgaagctcatccgtcaacatggctctattgagaacata
ttggagaacataaacaaagagaggttccatataccagatgattggccataccaagaggct
cggcagctttttaaagaaccagtagtctatactgatgaagagcaacttgagattaagtgg
actgctccagatgaagaaggactgattacctttcttgtgaatgaaaatggattcaacagt
gacagagtgacaaaggcaatagaaaaaattaaagcagccaagaacaagtcagctcagggc
cgattagagtcattttttaagccagttgctaacccacctgcacctattaaacgaaaggaa
agcaaatgcgtgcttagatctcccagaccagcaattgggcataagatgttttctcttcat
gcatctaggtccaggctcatggtccatgccagcttgagcttgccaatcccggacctaggt
gtcaagaactccacgtcattatccacaggtgtcatcttcagagcatga

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