Juglans regia (English walnut): 109008783
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Entry
109008783 CDS
T05245
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
jre
Juglans regia (English walnut)
Pathway
jre03030
DNA replication
jre03420
Nucleotide excision repair
jre03430
Mismatch repair
jre03440
Homologous recombination
jre03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109008783
03420 Nucleotide excision repair
109008783
03430 Mismatch repair
109008783
03440 Homologous recombination
109008783
03460 Fanconi anemia pathway
109008783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jre03000
]
109008783
03032 DNA replication proteins [BR:
jre03032
]
109008783
03400 DNA repair and recombination proteins [BR:
jre03400
]
109008783
Transcription factors [BR:
jre03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109008783
DNA replication proteins [BR:
jre03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
109008783
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
109008783
MMR (mismatch excision repair)
109008783
DSBR (double strand breaks repair)
HR (homologous recombination)
109008783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
109008783
NCBI-ProteinID:
XP_018844552
UniProt:
A0A2I4GKX9
A0A833YC71
LinkDB
All DBs
Position
1:35513939..35517261
Genome browser
AA seq
623 aa
AA seq
DB search
MPVNLTPNAIASIESGDVNAKPLVQVLDIKLIGSTQERYRLLLSDSVSTQHAMLATQLND
RVKSGRVTKGSVVQLIDYICSPVQNRKIIVVLNMETIIPDCEIIGNPKSLTESGSAAEKP
LPNKNLEHPTRVGGNHFGAQNPGKNVQSFPPTVQPPYQPPPNYRNHGPILKNDAPARIIP
IAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFDLLDSDGGEIRATCFNAVVDRF
YDAIEAGKVYLISKGSLKPAQKNYNHLKNEWEIFLETSSTVELCPEEDDSIPKQQFSFRP
ISEIESADNNSILDIIGVVISVNPSVPILRKNGMETQRRILNLKDGSGRSVELTLWGEFC
NREGQKLEEMINSGGFPVLVVKSGKVNDFTGKSIGTISATQLFINPDLPEASGLRNWFDR
EGKNAASVSISREIMAGGSKNEIRKTVSQIKDEGLGRSDKPDWITVKATISFIKTDTFCY
MACPLMIGDRQCNKKVTKSGNTRWLCDRCNQEFEECDYRYLLQAQIQDHSGLTWVTAFQE
TGEEILGCSAKELYLLKYEEQDDEKFGGIIRSRLFSQYLFRLKIKEELYGDEQRVKITVV
KADSVSYSSESRYTLDLISKFTK
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgaatctgacgcccaacgctatcgcctccatagaatctggtgatgtcaacgcc
aagccattggtgcaggtcctggatatcaagctcattgggagcacgcaggagcggtaccgt
ttgctgctctccgactccgtttcgactcagcacgccatgctggccacccagctcaacgac
cgagtcaagtccggccgtgtcacgaagggctccgtcgtccagttgatcgattacatttgc
agccccgtccagaaccggaaaataattgttgtgctgaacatggaaactattataccagac
tgtgagataattgggaatccaaaatcactgactgaatctggttcagcagctgaaaaacca
ttgccaaataagaatttagagcaccccacaagggttggtggtaaccatttcggtgcccag
aatcctggtaaaaatgtgcaaagtttcccaccaacagttcaacctccataccagccacct
ccaaattacagaaatcatggtccaattctgaagaatgatgcaccagcacgtataattcct
attgctgctttgaatccttaccagggtcgctgggctatcaaggcaagagttactgcaaaa
ggggacatccgtcgttataacaatgcccggggagatgggaaggtgttctcttttgacctc
cttgactctgatggtggagaaattcgtgcgacttgctttaatgccgtagttgaccgcttc
tatgatgcaattgaggccggtaaagtctatttgatctcaaagggtagcttaaaacctgca
cagaagaactacaaccatttgaagaatgagtgggagatatttctggagacaagttcgact
gtggagctttgcccagaggaagatgattctataccaaagcagcaattttccttcaggcct
atcagtgaaattgagagtgctgacaacaattccatacttgacattattggtgttgtgata
tctgtgaatccgtcagtgcccattctgagaaagaatggaatggagactcagagaagaatt
ttgaatttgaaggatggatctggcaggagtgttgagcttaccctttggggagaattttgc
aacagggaaggtcaaaagctggaagagatgatcaattctgggggttttccagttttagtt
gtcaaatctgggaaggttaatgacttcactgggaaatcgatagggacaatttctgccaca
cagctcttcataaacccagatttgcctgaggcttctggcctgagaaattggtttgatcga
gaggggaaaaatgctgcttctgtgtctatttctagagaaattatggcaggaggatctaag
aatgagatacgtaaaacagtgtcacagatcaaggacgagggtcttggaagatcagataag
cctgattggatcacggtgaaggcaaccatatctttcattaaaacggatactttctgttac
atggcctgcccgttgatgattggagatagacagtgtaataagaaagttacaaagtcagga
aacacaagatggctatgtgacaggtgcaatcaggagtttgaggagtgcgattatagatac
cttcttcaagcgcaaattcaagaccattcgggattgacttgggtgacagctttccaggaa
actggggaagagatcttaggttgctcggcgaaggagttgtacttgttgaagtatgaagag
caagatgacgaaaagtttggaggaattatccgaagcagactcttcagccagtatcttttc
cggcttaaaatcaaagaggaactatatggtgatgaacaaagggtgaagattactgtagtt
aaggcggatagtgtgagctattcttcagagagcagatacacacttgatctgatttcaaag
tttactaaatag
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