Juglans regia (English walnut): 109008893
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Entry
109008893 CDS
T05245
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
jre
Juglans regia (English walnut)
Pathway
jre03030
DNA replication
jre03410
Base excision repair
jre03420
Nucleotide excision repair
jre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109008893
03410 Base excision repair
109008893
03420 Nucleotide excision repair
109008893
03430 Mismatch repair
109008893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jre03032
]
109008893
03036 Chromosome and associated proteins [BR:
jre03036
]
109008893
03400 DNA repair and recombination proteins [BR:
jre03400
]
109008893
DNA replication proteins [BR:
jre03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109008893
DNA Replication Termination Factors
ELG1-RFC complex
109008893
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
109008893
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109008893
Check point factors
HRAD17(Rad24)-RFC complex
109008893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
AAA_assoc_2
AAA_16
Mg_chelatase
AAA_11
ResIII
DUF3802
AAA_5
nSTAND3
AAA_14
SLFN-g3_helicase
AAA_24
AAA_2
PhoH
AAA_28
AAA_30
AAA_19
AAA_7
AAA_25
NPHP3_N
CPG4
DUF3853
T2SSE
RNA_helicase
Parvo_NS1
DUF815
IstB_IS21
DNAX_ATPase_lid
AAA_18
TIP49
bpMoxR
NB-ARC
ATPase_2
Motif
Other DBs
NCBI-GeneID:
109008893
NCBI-ProteinID:
XP_018844709
UniProt:
A0A833TT13
A0A2I4GLE7
LinkDB
All DBs
Position
15:3051555..3059449
Genome browser
AA seq
342 aa
AA seq
DB search
MAPVLQSSQQWVEKYRPKQVKDVAHQEEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGGYPCPPFKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS
SRILHICKEERLNLDAEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI
PQEIVKAFLVTCKSGNFDVANKEVNDIIAEGYPVSQMLYQLLELVVEADDVSDEQKARIC
KKLAEADKCLVDGADEYLQLLDVASNTMRALCNMPQEFSYEC
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagtattgcaaagctctcagcaatgggtcgaaaaatatcggccaaaacaagtg
aaagatgtagcacaccaggaggaggtggttcgggtcctcacaaacaccctcgaaaccagc
aattgcccgcacatgctcttctacggcccaccgggcactggaaagaccaccaccgcgctt
gccattgcccaccagctctttgggcctgagctctacaagtctagggtgctggagctgaat
gcgagtgatgaccgtggcataaacgttgttagaacaaagatcaaagattttgctgccgtg
gctgttggttctggtcagcgtcaaggaggttatccatgtccaccattcaagatcatcatt
ctagatgaggcagattcaatgaccgaagatgctcagaatgccctgaggcgtactatggaa
acttactccaaagttacaagattttttttcatctgtaattacatcagcaggatcatagaa
ccacttgcttcaaggtgtgcaaagttcaggttcaaaccactttcagaagaaatcatgagc
agtcgaatattgcatatttgcaaagaagaacgtctcaatctggatgccgaggctctttca
accttgagttctatttcacaaggtgatcttcgtcgggctattacgtacttacagtcagct
gcgcgattatttggatcatccatttcttcgaaggatctgattagtgtgtctggggtcatt
ccacaagagattgtcaaggcattccttgtaacttgtaagagcggtaactttgatgtggca
aacaaggaagtcaatgatataattgcagagggatatccggtctctcagatgctttaccag
ttacttgagctggttgttgaggcagatgacgtatcagatgaacagaaggccagaatttgc
aagaaattggctgaagcagataagtgtctcgttgatggtgcagacgagtacctgcagctg
ctggatgtagctagcaatacaatgcgagctctttgtaacatgccgcaagaattttcttac
gagtgctag
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