Juglans regia (English walnut): 109009115
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Entry
109009115 CDS
T05245
Name
(RefSeq) eukaryotic initiation factor 4A-15-like
KO
K03257
translation initiation factor 4A
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
109009115
03012 Translation factors [BR:
jre03012
]
109009115
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
jre04147
]
109009115
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109009115
mRNA cycle factors
Stress granule specific factors
109009115
Translation factors [BR:
jre03012
]
Eukaryotic type
Initiation factors
eIF-4
109009115
Exosome [BR:
jre04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109009115
Exosomal proteins of bladder cancer cells
109009115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40
EIF3I
Beta-prop_WDR41
WDR55
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
ResIII
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_ACSF4
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
NBCH_WD40
AAA_22
Beta-prop_Nup120_160
CMS1
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
109009115
NCBI-ProteinID:
XP_035546973
UniProt:
A0A6P9ESY1
LinkDB
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Position
1:36025760..36037708
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AA seq
801 aa
AA seq
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MCGDATNWDEDAYRESILKEREIRTRTVFRTVWAPSQNPNPDAIVVASSDGSLASYSISS
CISKLQYGFNNTRSQHFLVAEPQSFLQGHDGPAYDIKFYGRGEDTLLLSCGDDGRIRGWR
WKEFTNSDVPIPLQGNHVKPVLDLANPQHKGPWGALSPIPENNSIDVNMQGGSIFSASGD
SCAYCWDVETGKIKTVFKGHSDYLHCIVARNTANQAITGSEDGTARIWDCKSGKCIQVID
PAENSKLKGFVSCVSCIALDGSESWLACGSGRSLSIWNLPASECVSRISTRASVQDVLFE
DNQILAVGAEPLLSRFAINGAVLSQIQCAPLSAFSVSIHPSGVTAVGGYGGLVDAISEFG
SHLCTFRCKCILRKTILSSTFAFHRSTVMAGLAPEGSQFDARQFDTKMNELLSADGQDFF
TSYDEVYESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA
TFCSGILQQLDYSMMECQALVLAPTRELAQQIEKVMRALGDYLGVRVHACVGGTSVREDQ
RILSSGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPS
KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCD
LYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV
LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLF
DIQKFYNVVVEELPSNVADLL
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggagacgcgacgaactgggacgaagatgcgtacagggaaagcatattgaaggag
agggagatccgaacccgaaccgttttccggactgtttgggcaccctcccaaaaccctaat
cctgacgccattgtcgtggcctcaagtgacggttcgctcgcctcctactccatctcttcc
tgcatttccaaactccaatatggttttaacaatacgaggtcgcaacacttcttagtggct
gagcctcagtcctttctgcaaggacatgatggacctgcatatgatatcaaattctatggc
cgtggtgaagataccttgttgctaagctgtggtgatgatggtcggattcgagggtggagg
tggaaggagtttacaaactcagatgtgcccattcctttgcaagggaatcatgtgaagcca
gtccttgacctggcaaatcctcaacataaaggtccttggggtgctctttctccaatccct
gaaaataattccattgatgttaatatgcagggggggtctattttttcggcttccggtgat
tcttgtgcatattgctgggatgtggaaactggtaaaatcaaaacagtttttaaagggcat
tcagattacttgcattgtatagtagcccgaaacactgccaatcaggctataactggttca
gaggatgggactgcacgaatctgggattgcaaaagtggaaagtgtattcaagtaattgat
ccggcagaaaattcaaagttgaaaggtttcgtctcatgcgttagttgcattgctcttgat
ggaagtgagagctggttggcttgtggcagtggtcggagtttatccatttggaatcttcct
gcttctgagtgtgtttcaaggatttcaactcgcgcttctgttcaggatgtattatttgaa
gacaatcaaattttagctgttggagcagaacctctcctcagtcgttttgccataaatggg
gcagttctttcacaaatacaatgtgctcctctgtcggcattttctgtctccatacatcca
tctggggttacagcagttggaggttatggaggtcttgtagatgctatctcagagtttgga
agccacctttgcacatttcgctgcaaatgtatccttcgcaaaacaattctctcttcgact
ttcgcttttcacagatcaacagtcatggcaggcttggcaccagaggggtcgcaatttgat
gctcgtcagttcgataccaaaatgaatgagttactttcagctgatggacaggatttcttt
acatcctatgatgaggtttatgaaagttttgacgctatgggactgcaagagaatcttctg
aggggcatttatgcttatggttttgaaaaaccctcagctattcagcaaaggggaattgtt
cccttctgcaagggtctagatgttattcaacaggctcaatctggaactgggaagactgca
actttctgctctggtattctgcaacaactcgattatagcatgatggagtgccaggctttg
gttctggctccaactagagaacttgcccaacagattgagaaggttatgcgggcacttgga
gattatcttggtgtgagggtacatgcttgtgttggtggaacaagcgttcgtgaagaccag
cgcattctgtccagtggggttcatgttgttgttggcactcctggacgtgtgtttgatatg
ctgcgaagacagtcacttcgtcctgattacataaagatgtttgtattggatgaggcagat
gaaatgctttcccggggtttcaaggatcagatctatgatattttccagcttctaccatca
aagattcaggttggggtattctccgccacaatgccacctgaggcccttgagattacaagg
aagttcatgaacaaacctgtaagaattcttgtgaagcgtgatgagcttaccctggagggt
ataaagcagttttatgtcaatgttgataaggaggaatggaaacttgagaccctctgcgac
ctttatgaaactctggccatcacccagagtgtcatttttgtgaacaccaggcgcaaggtt
gattggctgactgacaagatgcggagccgtgaccacacggtctctgccacccatggagat
atggaccagaacacgagagacattatcatgcgtgaatttcgttccggatcgtctcgcgtc
cttataaccactgatcttttggcacgtggtattgatgtccagcaagtctcccttgtaata
aattatgatctccctacacagccagagaactatctccatcgtattggacgaagtggacgg
tttgggaggaagggtgtggccatcaacttcgtaacaaaggatgacgaaaggatgctgttt
gacatccagaagttttataatgtcgtagttgaggagctgccatcaaatgtcgccgatctc
ctctaa
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