KEGG   Juglans regia (English walnut): 109009150
Entry
109009150         CDS       T05245                                 
Name
(RefSeq) DNA-repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
jre  Juglans regia (English walnut)
Pathway
jre03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    109009150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jre03400]
    109009150
DNA repair and recombination proteins [BR:jre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     109009150
SSDB
Motif
Pfam: BRCT PTCB-BRCT BRCT_2 RTT107_BRCT_5 Hydrolase_6
Other DBs
NCBI-GeneID: 109009150
NCBI-ProteinID: XP_018845074
UniProt: A0A2I4GME4
LinkDB
Position
12:27530556..27537120
AA seq 373 aa
MSGSKKSASYGGGNETGKRNLPSWMSSRENEVGDDEESNKGENPKQAKGRGKEHTGSSNL
SKLLEGVVFVLSGFVNPERGILRSQALEMGAEYRPDWNSDCTLLVCAFPNTPKFRQVESD
CGTIVSKEWISECYTQKKLVDIESFLMHVGKPWRRRDIPIESQAFADQKASPHKKPEKKA
ERGRHSKPIAPVSSEHHLASNTANECFSPSEVKRWAVNDLNRTIRWLESQDEKPDPRDIR
KIAAEGILTCLQDVIDSLEQKQDIQHVTEQWNFIPRAVEELARLEDTGNALASISNEERC
RQAKTCKRLYEEELSNLADNPSTMKKGPNTDERNGRIKGKSKDAAEYDSDETIEMTEEEI
ELAYKTVSSKIRQ
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgtctggatcaaagaaaagcgcgagttacggtggtggtaatgagactgggaagcgaaac
cttccttcatggatgagttcaagagagaatgaggttggtgacgatgaggaaagtaataag
ggtgaaaaccctaagcaagctaaagggcgcggtaaagaacatacaggctcctcaaatctc
tccaaacttctggaaggtgtagtgtttgtgttgtcagggtttgttaatcctgagcgtggt
attttgcgatcacaagcactggaaatgggagcagagtatcggccggactggaactcggat
tgcactctcttggtttgtgcatttcccaacaccccaaagtttagacaagtcgagtcagat
tgcgggactattgtttcgaaggagtggatatctgagtgttatacacagaagaagcttgtt
gacattgaaagctttcttatgcatgttggcaaaccatggcggagaagggacattcccatt
gaaagccaagcttttgcagatcaaaaggcatcaccacacaaaaaacctgagaagaaagct
gaaagaggacggcattcaaagccaattgctccggtatcctcagagcatcacctagcttcc
aatactgccaacgagtgtttttctccttctgaagtgaagaggtgggctgtcaatgatttg
aatagaaccatcagatggctagagagtcaagatgaaaagccagatccaagagatataagg
aaaatagctgctgaagggatcttaacctgtttacaagatgtcattgattctcttgaacaa
aagcaggatatccagcatgtaactgagcagtggaacttcatccctcgtgcggttgaggag
ctggcaaggcttgaggacactggaaatgcgttagcctcaatctcaaatgaggagcgttgc
agacaggcaaagacctgtaaacgactatatgaggaggaactgagcaatttggctgataat
ccttcgaccatgaagaaagggccaaatactgatgaaaggaatgggagaatcaaaggcaaa
agcaaggatgcagcagagtatgacagcgatgaaaccatcgaaatgacagaagaggaaata
gagcttgcctacaaaactgtctcatctaagatccgtcaatga

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