Juglans regia (English walnut): 109009224
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Entry
109009224 CDS
T05245
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
jre
Juglans regia (English walnut)
Pathway
jre03082
ATP-dependent chromatin remodeling
jre03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109009224
03083 Polycomb repressive complex
109009224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jre03036
]
109009224
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
109009224
Histone modification proteins
HAT complexes
HATB complex
109009224
HDAC complexes
Sin3A-HDAC complex
109009224
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
109009224
PRC2.2
109009224
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
109009224
Heterochromatin formation proteins
Other heterochromatin formation proteins
109009224
Chromatin remodeling factors
NuRD complex
109009224
NuRF complex
109009224
NuRF complex (fruit fly)
109009224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
WD40_RFWD3
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_RIG_1st
eIF2A
WD_LRWD1
MIOS_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
NBCH_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
109009224
NCBI-ProteinID:
XP_018845162
UniProt:
A0A2I4GMM7
A0A833TSZ5
LinkDB
All DBs
Position
14:1857840..1861289
Genome browser
AA seq
423 aa
AA seq
DB search
MGKDEEEVRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARHYDDDRADVGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHNTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDATQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQHLLIWDLRTPSVSKPVQSVIAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKISTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLPEETT
KAA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagacgaggaggaggtgaggggggagatcgaggagaggctcataaatgaggag
tacaagatatggaagaagaacacccccttcctctacgatctggtcattacccacgccctc
gagtggccttctctcaccgtcgagtggcttccggaccgagaggagccccccggcaaggat
tattccgtccagaagatgattctcggcacccacacctccgaaaacgagcccaattacctt
atgctagcccaggtccagctccctctcgaggacgccgagaacgacgcccgccactacgat
gacgaccgcgccgatgtcggtggcttcggctgcgccaatggcaaggtgcaaataatccag
caaataaatcacgatggagaggttaatcgtgctcgctatatgcctcaaaacccgtttatt
atcgccactaagacagttagtgccgaagtttatgtttttgattatagcaaacacccatct
aagcctcctctagatggggcgtgtagtcctgacttacggttgaggggccacaacactgaa
ggatatggcttatcctggagtaagtttaagcagggccatttactgagtggctctgatgat
gctcagatatgcttgtgggatattaatgcaactcctaagaacaaaagcctcgacgccaca
caaatttttaaggttcatgaaggtgttgtagaagatgtagcttggcatctgaggcacgaa
tacttatttggttcagttggtgatgatcagcacctgcttatatgggatctccggactcca
tcagttagcaagcctgtccaatccgtcatcgctcatcaaagtgaggtaaactgcttagct
ttcaatccctttaacgagtgggttgttgcaacggggtctactgataaaacagtcaagttg
tttgatctacgcaagatcagcactgcactccacacctttgattgtcacaaggaggaagtt
ttccaagttggttggaatccaaaaaatgagactatattagcttcttgttgccttggtagg
agactcatggtgtgggatcttagcaggattgatgaagaacaaacgccagaggatgccgaa
gatggaccgccagagttactctttattcatggtggtcacacgagtaaaatatctgatttt
tcttggaacccgtgtgaagattgggttgttgctagtgtagctgaggataacatacttcaa
atctggcagatggcagagaacatctaccatgatgaagatgatttaccagaagaaacgact
aaggctgcttaa
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