Juglans regia (English walnut): 109009488
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Entry
109009488 CDS
T05245
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
jre
Juglans regia (English walnut)
Pathway
jre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109009488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
109009488
03036 Chromosome and associated proteins [BR:
jre03036
]
109009488
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109009488
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109009488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
109009488
NCBI-ProteinID:
XP_018845507
UniProt:
A0A833TWK6
A0A2I4GNN0
LinkDB
All DBs
Position
11:34128246..34135427
Genome browser
AA seq
719 aa
AA seq
DB search
MLGFSSAPADGASSTGDLVPFSSEARATAVCPLHHGLKPPISRLSISWARGNSLRVSFFR
RPSGDDSEGDEFGGKVLEVRLSGGDGDGDMSDAQFRRIAYGSVSPFALLQSRRNSAASLS
KISSPYHVEWWEYVMEYSKDINSLLGDPKSLTSPAIEDPKAVLQKAEEPICLKAAWDVME
IFYADKQSQSWLPERLVDWLAAYDGLLSSTQATIHSQLVSFQKELVALQVIEDSPKYWEV
LSAALAVGWLDVVVKMLRLHGSYQLDQIGNRETENGLVEAVAVLISKMPRLRPELEAGRL
GECYRAKPDFVKAWEKWRAHITKLDCSAYWVRCDHNQTREGLRNMLQIMLGNTNSLCTAT
CHWMELYIAHFLYIRPFTAGLESMYSLAQKCMQLKPMTISHRLIRLLLGIIGDNTEVVLA
ECSRAFGPWMVAHAIELLASGSDQAETLLREEHYNLGGISIEELHRLVYAQVLSSDALTW
QIAPIYLTSCIKQGMGLLEILLSKQPVQDVQILLKVIEICRLYELDSVSSNIMKIAGVYH
WKHGRKGSGVFWLQQARDEVRLNRIAQQLFDFVGQSISDESFKQWEGLIELLGAESKTAG
GLEFLHKYRDFKKFLKQVNNGKTTDAARQAVESLISLMKNPSTPRQFWLPILYDSLKLLS
WQERPLLNVSETNLLLNKLQELSMAKLRPDFIEANLPPQALGSVRLALATNLGRAIVEE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgctcggcttctcgtcagcccccgccgacggcgcctcatccactggagatctcgtgcct
ttttcgtcggaagcccgagccaccgcagtctgccccctccaccacggcctcaagccaccg
atctctcgcctttccatctcctgggcgcgaggaaactccctccgcgtctcattcttccgg
agaccatccggagatgactccgaaggagacgaattcggcgggaaagtgttggaggtgagg
ctcagcggtggagatggagatggagatatgagtgacgcgcagttccggaggatcgcgtac
ggttccgtctcaccgttcgctcttcttcagagccggagaaactctgccgccagcttgtcg
aagatctcgtctccgtatcacgttgagtggtgggagtacgtgatggagtatagcaaggac
ataaattcactgctcggtgatcctaagtcgcttaccagtccagcgattgaagatccaaag
gccgttttacagaaagctgaggagccaatctgtctgaaagctgcatgggacgtgatggaa
atattttatgctgacaagcaatctcaatcatggctacctgaacggcttgttgattggtta
gctgcttacgatggtcttctctcctcgacacaagcaacaatccattcacaacttgtatct
tttcagaaagagcttgttgctttacaggtcatcgaggatagtcctaaatattgggaagta
ttgtcggcagcattggcagttggctggctagatgttgtggtgaaaatgctgcgcttgcat
ggatcttatcagctcgaccagattggaaatcgcgagacagagaatggattggtagaggca
gtggctgttcttatttccaaaatgccacgtttgcgtcccgaactagaagctggaagatta
ggtgaatgctatagagccaaacctgattttgtcaaggcttgggagaaatggcgggcacat
attactaagctggactgtagtgcatactgggttcgttgtgatcataaccagacccgggaa
ggtttgaggaatatgctacaaatcatgctgggaaacacaaacagtctttgcactgcaacg
tgtcactggatggagctatatattgctcactttctatacataaggccattcacggcgggt
ttagaaagtatgtatagcctagcccagaaatgcatgcagttaaaaccgatgaccatatcc
cataggttgatacgacttctgcttggaattataggagataataccgaggttgtcttagct
gaatgctccagagcatttggcccttggatggttgcacatgccatagagttgttggcttcc
gggagtgatcaagcagagactcttcttcgtgaagagcattataacttgggtggaatcagc
attgaagaactccatcgacttgtctatgcccaagttctatcttcggatgcattgacttgg
caaatagctccaatttatttgacatcatgcataaagcaggggatgggtttgttagagatt
ctattgagcaagcaacctgttcaagatgttcaaatactccttaaggtcatagagatatgc
cgtctatacgaacttgacagtgttagttcaaatattatgaagattgctggagtataccac
tggaagcatggaaggaaaggttctggagtattttggcttcagcaagcccgagatgaagtt
cgtctgaacaggattgctcagcagttgtttgattttgttgggcaatcaatctctgatgaa
agtttcaagcaatgggaaggattgattgaattgttgggtgctgaatctaagactgctgga
ggtcttgagtttctgcacaagtacagggattttaaaaaattccttaagcaggttaacaat
ggaaaaactactgatgccgcgcggcaagctgtagaatctcttatatctcttatgaaaaac
ccctctacacctcggcaattttggctgcctattctgtatgactcgttgaagctgctcagt
tggcaggagcgccctctgctaaatgtctccgagaccaaccttttgttgaataaactgcaa
gagttgtccatggcgaagctgagaccagacttcattgaagccaacctgccaccccaggcc
ttaggctctgttaggctagctcttgctacaaatcttggacgtgctatcgtggaagaatga
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