KEGG   Juglans regia (English walnut): 109009529
Entry
109009529         CDS       T05245                                 
Name
(RefSeq) helicase and polymerase-containing protein TEBICHI isoform X1
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
jre  Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:jre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jre03400]
    109009529
Enzymes [BR:jre01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     109009529
DNA repair and recombination proteins [BR:jre03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    109009529
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C Helicase_dom4_arc ResIII HHH_5
Other DBs
NCBI-GeneID: 109009529
NCBI-ProteinID: XP_035538605
UniProt: A0A6P9DT42
LinkDB
Position
11:complement(34493494..34515605)
AA seq 2216 aa
MASGSPRGRIDQFFVSKKRKQTSPGFKSGRSKKHVKATFEGSPSAKGTLDNCLVTSKDDN
SPRSSYTVHDSLAGPDAVRRNLALEIYNSSKDEFKQPLFSEELHPATSEAVEVAQNEASH
GLSVMGDAAVVDLAKGSSKFPHGADNSDLKKFAADFLSLYCSERKPSVNSQSEPEVNEHK
RHYSPLCLDRMDKTSKKKCNTNDSHLEGEFTCSKKKNHEDMQPGDVDRAVLSVFSSSREV
IDGDSLVDLQPCLKKCSNTPKSSVNTTELRTPGSLTVKACSNETPKSIRGSSIFSPGEAF
WNEAIQFADGLCAPLAAEETHSTTRDHVLNSCNLRNGVCHDNSLKTLNEGEKRAWNMELS
ASLGSLGKHAKDLHKEVSPLPVKHFDFSCEGKNLNESTSHHHGVDGSKCATHKGSEQSEC
GSVNVKGLETSNILIRCRKAHSDEKLHEVQEMTSTIVINKEAGGMSCPDNGCMTSNSPVN
EIKNLVLNHESDEASTPSSFVRLEDRSDLHSWLPSEICSTYRKRGISKLYPWQVECLQVD
GVLQRRNLVYCASTSAGKSFVAEILMLRRVISTGKMALLVLPYVSICTEKAEHLEVLLEP
LGKHVRSYYGNQGGGTLPKDTSVAVCTIEKANSLINRLLEEGRLSEIGIIVIDELHMVGD
PSRGYLLELMLTKLRYAAGEGNSESSSGESSGRSSGKADPANGLQIVGMSATMPNVAAVA
DWLQAALYQTEFRPVPLEEYIKVGNTVYSKKMDIVRTISKAADLGGKDPDHIVELCNEVV
QEGHSVLIFCSSRKGCESTARHVAKFLERFSVNVRNNESEFVDITSAIDALRRCPVGLDP
ILEETFPSGVAYHHAGLTVEEREVVETCYRRGLLRVLTATSTLAAGVNLPARRVIFRQPR
IGRDFIDGTRYKQMAGRAGRTGIDTQGESVLICKPEEIKRIMGLLNETCPPLHSCLSEDV
NGMTHAILEVVAGGIVQTANDIHRYVRCTLLNSTKPFQDVVKSAQESLRWLCHSKFLEWN
EDTKLYSTTPLGRAAFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLVTPINVDVEP
DWELFYERFMELSALDQSVGNRVGVVEPFLMRMAHGAPMRSSNQPRDLKRLRGKHENKFA
VTNSSILSDDQMRRVCKRFYVALILSRLVQEVPVVEVCEAFKVARGMVQALQENAGRFAS
MVTMFCERLGWHDLEGLVAKFQNRVSFGVRAEIVELTSIPYVKGSRARSLYKAGLRTPLA
IAEASIPEIVKALFESSSWAAQGSAQRRVQLGVAKKIKNGARKIVLDKAEEARAVAFSAF
KSLGFNVPHFSSRPLMSTTVGNQVRQGTATTYFGIDTSSNFDVVEHMNHISSKPSMEEND
NSDKVALESEGEKLIRRSDIDLLASEEVNSTAAVHCNFGTETSVVPVEGSVTGGAELNDT
VGNTKSADITDSIHLKQPNAISRIGDGYLHCGVPEPHNILSLGIKNSVCGKGPINAINTP
GGFDSFLDLWETAQEFYFDVHYNKRLDVNSVAPFEIHGIATCWENSPVYYVNLPKDLMWS
DKRREDYSSMCISGDKSSVSLPENWSEIVERRWNRIREILGKRNVRKFTWNLKVQIQVLK
IPAVLVQKFGSDLAGKNMGLELIDNSYLLLSPVNINDGIDMSIVTWILWPDEERSSNPNL
EKEVKKRLSSEAAAAASQSGRWKNQMRRAAHNGCCRRVAQTRALCSVLWKLLLSEELIEV
LMNIETPLVNVLADMELWGIGVDMDGCLQARNVLAKKLRHLEKEAYKLAGLTFSLYTAAD
IANVLYGHLKLPIPEGHNMGKQHPSTDKHCLDLLRHEHPIIPVIKEHRTLAKLLNCTLGS
ICSMARLSVRTHRYTLHGHWLQTSTATGRLSMEEPNLQCVEHVVDFKMNKDKDGDDTSTE
PYKINARDFFVPTQDNWLLLTADYSQIELRLMAHFSKDSSLIELLSKPHGDVFTMIAAKW
TGKPEDSVDSNERDQTKRLVYGILYGMGVNTLAEQLHCSSGEAAEKIQSFKSSFPGVASW
LHEAIASCREKGYVETLKGRKRFLSKIKFGNNKERSKAQRQAVNSICQGSAADIIKIAMI
NIYSVIAKGVDKPDSGSLTTQSEVLKGRCRIVLQVHDELVLEVDPSVTKEAALLLQMSME
NAALLLGMLSMVQNFYILRTCSFCSLFMICFSVPLHIKLKVGRTWGSLEPFQADQF
NT seq 6651 nt   +upstreamnt  +downstreamnt
atggcgtctggatcgcctcgggggcgcatcgatcagttttttgtttcgaagaaaaggaaa
caaacatcacctggtttcaagtctgggagaagcaagaaacatgtgaaagctacatttgaa
ggctctccaagtgccaaaggtactctggacaattgtttggtgacttcaaaagatgataac
agtcctaggtcttcatatacagttcatgattccttggctgggccagatgcagtcagaaga
aatttggcactggagatttataactcttccaaggatgaatttaagcagcccttattttca
gaagaattgcaccctgcaacatctgaagcagttgaagtggctcagaacgaagcatctcat
ggattatctgtaatgggtgatgctgcagttgtagatttggcaaaaggttcctcaaaattt
ccccacggtgcggataattcagacctaaaaaagttcgctgctgatttcctctctttgtat
tgtagcgagcgtaaaccaagtgtaaattcacagtcagagccagaagtgaatgaacataag
agacattacagcccactgtgcctcgacaggatggataagacatccaagaagaagtgcaat
accaatgattcacatttagaaggtgaattcacttgctctaaaaagaaaaatcatgaggac
atgcagcctggtgatgttgatagagctgtattatcagtttttagttcttctagagaggtt
attgatggtgatagtctggttgatcttcaaccatgcttgaaaaaatgcagcaatacgcct
aaatcatctgtcaatacgacagaattacgtacaccgggttctttgactgttaaagcatgc
agtaatgagacccccaagtcaatccgtggaagctccatattttcaccaggagaagctttt
tggaatgaagcaattcaatttgctgatggtttgtgtgctcctctggccgctgaagaaact
catagtacaacccgagatcatgtcttgaactcgtgcaatttgagaaatggtgtctgtcat
gacaattcattgaaaacattaaatgagggtgagaagagagcctggaacatggagttaagt
gcttctttggggtccctggggaagcatgcaaaagatctgcataaagaagtatccccactt
cctgttaagcattttgacttctcatgcgagggcaaaaacctgaatgaaagtacctcacac
catcatggtgtagatggttcaaaatgtgctactcataaaggcagcgagcaatctgaatgt
ggttctgtaaatgtcaaagggctagaaactagtaatatcttgattcgatgtcgcaaagcc
cactcagacgaaaagttgcatgaggtacaggagatgacttctactattgtaatcaacaaa
gaggctgggggtatgtcatgtcctgataatggttgtatgacatccaattcaccagtaaat
gaaatcaagaatttggttcttaaccatgaatctgatgaagcaagtactccttcaagtttt
gtgcgtcttgaagatcgttcagatctacacagttggcttccatctgaaatatgcagtaca
tatagaaagagaggaatttcaaaactgtatccttggcaggttgagtgccttcaggtagat
ggtgttttacagagaagaaatctagtatattgtgcatctacaagtgctggtaaaagtttt
gttgctgaaattctaatgttgcggcgggtcatatcaactggaaaaatggcactacttgtc
cttccttacgtatcaatttgtacagaaaaggcagaacatctggaggttcttcttgaacca
ctcgggaagcatgttcgtagttattatggaaatcaaggtggtggaacacttcctaaagat
acttctgttgctgtctgcacaatagagaaggcaaactctttaataaacagattgcttgaa
gagggtcgcctatctgaaattggaattattgtgattgatgagctacacatggttggtgat
ccaagtaggggctatcttttggaacttatgttgacaaagcttcgttatgcagctggtgaa
ggcaattcagaatcaagtagtggagaaagttcaggtaggagcagtggtaaagctgaccct
gcaaatggtctgcaaatagttggaatgagtgcgaccatgccaaatgtggcggcagttgcc
gactggctccaagcagcattataccagacagaatttcgaccagttccattagaagaatat
attaaggttggcaacacagtttatagcaaaaaaatggacattgttagaacaatttcaaaa
gcagctgatcttggaggtaaagatccagatcatattgttgaactgtgcaatgaggttgtt
caagagggtcattcagtgttgatattttgctctagtcgaaaaggatgtgaatcaactgcg
aggcatgttgcaaaattcctggaaagattttctgttaatgttcgtaacaatgaaagcgag
ttcgttgatattacgtcagctattgatgccttacgaaggtgtcctgttggattggatcct
atattagaagaaactttcccttctggcgttgcctatcaccatgctggcctcacggttgag
gaaagagaggttgttgaaacctgttaccgcaggggacttttacgcgtcttaactgctaca
tctaccttagctgctggggttaacctgccagctaggagggtcattttccgacaacccagg
atcggtcgtgattttattgatgggacaaggtacaaacagatggctggccgggctggtcgg
actggaatagatacacagggggaaagtgtactaatttgcaaaccggaagagatcaaaaga
attatgggacttcttaatgaaacctgtccaccattgcattcttgtctgtctgaagatgtg
aatggaatgactcatgctattttagaagttgtggccggcggaattgttcaaactgctaat
gatattcatcgatacgttaggtgtactcttctcaattccaccaagccatttcaagatgta
gtgaaatcagcccaggaatctcttcggtggttatgccacagtaaatttcttgaatggaat
gaagataccaagttatatagcaccacaccccttgggcgtgcagcttttggcagttctctc
tgcccagaagagtctcttattgtgctggatgatctttcaagggcaagagaaggatttgtg
cttgcatctgacttgcatttagtttacttagtaacaccaattaatgttgacgttgagcca
gattgggaactattctacgagcggttcatggaattatctgctcttgaccagtcagttggc
aatagagttggagtggtggaaccatttttaatgcgcatggcgcatggtgcacctatgcgt
tcttcaaatcagccaagagatttgaaaaggttgcgaggcaaacatgaaaacaaatttgcg
gtcacaaacagttcaatcctttcagatgatcaaatgcgacgagtgtgtaaacgtttctat
gttgcactgatcctatcaagactagtgcaggaagttcctgtggtggaggtttgtgaagct
tttaaagtggctagaggaatggtgcaagccttacaagagaatgcaggaaggtttgcatct
atggttaccatgttttgtgagagacttggatggcacgatctggaaggcttggttgccaag
ttccaaaatcgcgtttcatttggagtaagagcagaaattgtagagcttacttcaattcca
tatgttaagggttctcgagcaagatcactttacaaagccggcttgcgtacacctctagca
attgcagaagcttccattcctgaaattgtcaaagctctttttgaatcttcttcatgggct
gcacaaggttcagcacaaagacgggtacaactgggagtagccaagaagattaaaaatggt
gcacgcaaaattgtcctggataaggctgaagaagcaagggcggttgctttctcggctttt
aaatcactgggatttaacgttccacacttttcttctcgacccttaatgtcaactaccgtt
ggcaatcaagtgaggcaaggaactgcaactacatattttggaattgacactagcagtaat
tttgatgtggtggagcacatgaatcatatttcctccaagccatccatggaagaaaatgac
aattctgataaagtcgctttggaaagtgaaggagagaagttaataagaagatcggatatt
gatttgttggcttcagaagaagtaaactcaacagctgcagtacactgtaactttggtact
gaaacttctgtggtaccagttgaaggttctgtaaccggtggtgctgaactgaatgatact
gttggtaataccaaaagtgcagacattacagactctattcatttaaaacaacccaatgcc
atttccaggataggtgatgggtatcttcattgtggagtaccagaaccacacaacattttg
tctcttggcattaagaatagcgtttgtgggaaaggccctatcaatgcaattaatactcct
ggtggatttgattccttcttagacctctgggagactgcacaggaattctattttgatgtc
cattacaacaaaagattggatgtgaactctgttgccccatttgaaatacacggcatagcc
acttgttgggaaaattctcctgtatactatgtcaatttgcctaaggatctaatgtggtct
gacaaaagaagagaggattactcatccatgtgtatatctggtgataagagtagtgtttca
cttcctgagaattggtcggagatagttgaacgaagatggaataggattcgtgaaatattg
ggaaaaagaaatgttagaaaatttacttggaatctaaaagttcagattcaggttcttaaa
attcctgcagtattagttcagaaatttggttcagatcttgctgggaaaaacatgggcctt
gaactaatagacaactcatacttattgttgtctccagttaatattaatgatggaattgac
atgtccattgtcacatggatcctctggcccgatgaggagagaagctccaacccaaacctg
gagaaggaagttaagaaacggttatccagcgaggctgcagctgctgctagtcagagtggg
aggtggaagaatcagatgcgaagggctgcacataatggttgctgccgtcgggttgcacaa
acacgagctttatgttctgtactctggaagttgcttctttccgaagagcttattgaagtc
ctcatgaatatagaaaccccattggttaatgttcttgcagacatggagctttggggaata
ggtgttgacatggacggatgcctccaggcacgtaatgtgttggcgaaaaagctgaggcat
cttgagaaggaagcttataagcttgctggcttgacattttcattatatacagcagcagat
attgcaaatgtgctgtatgggcacttgaagcttcccataccagaggggcacaatatggga
aagcaacatccaagtactgacaagcattgcttggatttattaaggcatgagcatcctatt
attccagtcattaaagagcaccgtacattggcaaagctcctaaactgcacattgggatca
atttgttcaatggctcgactatcagtgaggacgcataggtacacacttcatggtcattgg
ctccaaacgtcaacagcaacgggtcggctttcaatggaggaacctaatcttcagtgtgtt
gagcatgtggttgacttcaaaatgaacaaggataaagatggtgatgacaccagcactgag
ccttacaaaattaatgctcgtgatttttttgttcctacgcaggataactggttactgtta
acagcagattattctcaaatagaactgcggctgatggcacacttttctaaagactcctca
ctaattgaacttcttagtaagccgcatggggatgtttttactatgatagctgcaaaatgg
actgggaaacctgaggattctgttgactccaatgaacgagaccagactaagaggttggtg
tatggcattctttatggaatgggtgtgaacaccctcgcagaacaactgcattgtagctcg
ggagaagctgcagaaaaaatccaaagctttaaaagttcttttcctggtgttgcttcttgg
ctccatgaagcaattgcatcttgccgcgagaaaggatatgtggaaaccctcaaggggaga
aagcgtttcttgtcaaaaattaaatttggaaacaataaggaaagatcaaaagcccagaga
caagctgtcaattctatttgtcagggatctgctgccgacattattaagattgcaatgata
aatatttactctgtgattgccaaaggagttgataagcctgactctggttcacttacaaca
cagtctgaagttctcaaaggccgctgccgaattgtattacaggtacatgacgaattggta
ctggaagttgatccttccgtgacaaaggaagctgcattgttgttgcaaatgagcatggaa
aatgctgcccttcttcttggtatgctatctatggttcaaaatttttatattctgagaact
tgttccttctgtagtttattcatgatttgtttttcagttcctttgcacatcaaactgaaa
gtgggaagaacgtggggttctttggaacccttccaggctgaccaattttga

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