Juglans regia (English walnut): 109009546
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Entry
109009546 CDS
T05245
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
jre
Juglans regia (English walnut)
Pathway
jre03082
ATP-dependent chromatin remodeling
jre03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109009546
03083 Polycomb repressive complex
109009546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jre03036
]
109009546
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
109009546
Histone modification proteins
HAT complexes
HATB complex
109009546
HDAC complexes
Sin3A-HDAC complex
109009546
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
109009546
PRC2.2
109009546
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
109009546
Heterochromatin formation proteins
Other heterochromatin formation proteins
109009546
Chromatin remodeling factors
NuRD complex
109009546
NuRF complex
109009546
NuRF complex (fruit fly)
109009546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_SPT8
eIF2A
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
109009546
NCBI-ProteinID:
XP_018845607
UniProt:
A0A2I4GNY2
A0A834D4X7
LinkDB
All DBs
Position
1:complement(36447429..36463660)
Genome browser
AA seq
495 aa
AA seq
DB search
MESQPQVVKKKETRGRKPKPKDDKKEESGKVKEAKKSQQPTVDDKYTQWKSLVPVLYDWL
ANHNLVWPSLSCRWGPQLEKATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEH
ISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHA
VLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHISATATSPGA
GGSIIKPNSKPGEGNDKAADGPSVGPRGVYLGHEDTVEDVAFCPSSAQEFCSVGDDSCLI
LWDARVGSSPVVKVEKAHNADLHCVDWNPHDDNLILTGSADNSVRMFDRRNLTSNGVGSS
IYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYAKVGKKVERAARSPSSPPGLFF
QHAGHRDKVVDFHWNAFDPWTIVSVSDDCDSTGGGGTLQIWRMSDLIYRPEEEVLAELEK
FKSHVVACASKPRES
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgcagccgcaggtagtgaagaagaaggagacgaggggccggaagccgaagccc
aaggatgataagaaagaggaatctgggaaggtgaaggaggccaagaagtcccagcagccc
accgtcgacgacaagtacacccagtggaagtctctcgtccctgtcctctacgactggctc
gccaaccacaacctcgtctggccctctctctcttgccggtggggtcctcagctcgagaaa
gccacttacaagaatcgccagcgtctctatctctctgaacagactgatggtagcgttcca
aatactctggtcattgcaaattgtgaagttgtcaaacctagggttgcagctgcagagcac
atatcccagttcaatgaagaagcacggtcaccatttgtaaagaagtacaagaccatcata
catcctggggaggtgaacagaatcagggaactcccacagaactcaaagattgtggccact
catactgacagtcctgatgttctcatctgggatgttgaagctcaacctaaccgtcatgct
gtccttggagctaccaattctcgtccagatttgattttgactggacatcaagataatgca
gaattcgctcttgcaatgtgcccgactgaaccctatgtgctatctggagggaaggacaag
tcggtggttttgtggagtattcaggaccatatttcggcaacagccacatcaccaggagcc
gggggatcaatcattaaaccaaactctaaacctggggaaggcaatgataaagctgctgat
ggcccttctgttggaccaaggggtgtctaccttgggcatgaggatacagttgaagatgtg
gcattctgtccatccagtgcgcaggagttttgtagtgttggtgacgattcttgccttata
ttgtgggatgcacgagttggctccagcccagttgttaaggttgagaaggcacataatgct
gatcttcactgtgtcgattggaatccccacgatgataaccttattctaactggatcagca
gataattctgtccgtatgtttgatcggcgaaatctcacttcaaatggagttgggtcttct
atatataaatttgagggtcacagagctgctgttctttgtgttcagtggtctccagacaag
tcatctgtctttgggagttctgcagaggatggtctcttgaacatctgggattatgctaag
gttggtaaaaaggtagagcgagcagcaagaagtccaagttctcctccggggttgtttttc
cagcatgctgggcacagggacaaagttgttgacttccactggaatgcatttgatccatgg
acaattgttagtgtgtctgatgattgtgatagtaccggtggaggagggacattgcagata
tggcgcatgagtgatctgatctaccgacctgaagaggaggttctggcagagctggagaag
ttcaagtcgcatgtggttgcttgtgcttcaaagcctcgagagtcctga
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