Juglans regia (English walnut): 109009580
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Entry
109009580 CDS
T05245
Name
(RefSeq) elongation factor 1-alpha-like isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
jre
Juglans regia (English walnut)
Pathway
jre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109009580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
109009580
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109009580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Zn_ribbon_RanBP
Mg_chelatase
RUBY_RBDX
Motif
Other DBs
NCBI-GeneID:
109009580
NCBI-ProteinID:
XP_018845649
UniProt:
A0A2I4GP34
LinkDB
All DBs
Position
11:complement(35023024..35031894)
Genome browser
AA seq
756 aa
AA seq
DB search
MPRKVSYGVDYDEDYYDYEDYDVDHDLYVEENGKLPQSEKETINCGIWRCSVCTYDNDES
FSACDICGVLRNASINSGTNSDKKTVEGMCKGSGASKMAKSLFASFPQRMPKKAVSFQKP
NDAYGKEESNNSHRHMNMQGQFLEFHKAFITHSNHHVNIAPFKFDVPSPDDLVSDGLRSS
KMGLKANSTDLKTSRVSSSINEKNGVLSKSSTERSDSSSALMPKGRHFSRDKSNHLENDM
GNTLSSDKSSVCSPSLNLKGRNDKIDESSSSSMSGGNPQSLTNSLNKMDVNVGSGLSKNV
NTRVTRSKAEYKPEKWMLPDQAEDTLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKEM
HKYEKEAKLQGKGSFAYAWALDESTEERERGITMTVAVAYFDSKKYHVVVLDSPGHKDFV
PNMISGAAQADAAILVVDASVGSFEASMDGGKGQTREHAQLIRSFGVDQIIVAVNKMDAV
DYSNERFDFIKQQLGTFLRSCGFRDSSISWIPLSAMENQNLVAVPSNVCLLSWYHGPYLL
DAVDSLQPPTRDFSKPLLMPICDVVKLSSLGQVSACGKLEAGALRSGSKVLVMPSGNVGS
VRSLERNSQACTFARAGDSVAVSLQGIDGSLVMAGGVLCHPDFPVAIAKHLELKVLVLDV
TTPILIGSQLEFHVHHAREAARVVRILSLLDPKTGKVTKKAPRCLSAKQTAVLEVALQGP
VCVEEFSSCRALGRVFLRALGRTIAVGVVTRIIEET
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaagtgagttatggagttgattatgacgaagactactatgactatgaagat
tatgatgttgaccacgatttatatgtagaagaaaatggaaaattacctcaatcagagaaa
gaaactattaactgtgggatttggcgttgctctgtttgcacatatgataatgacgagagt
ttctctgcatgtgatatttgtggggttcttcgaaatgcttcaataaattctggcaccaat
agtgataagaaaacagttgagggcatgtgcaaaggttctggagcatccaaaatggccaag
tctctatttgcatcttttccgcaacggatgcccaaaaaggctgtatcatttcaaaagccg
aatgatgcttatgggaaggaagagagcaataactcccacaggcatatgaatatgcaagga
caatttcttgaattccacaaagcttttattactcatagcaatcaccatgttaatatagcc
cctttcaagtttgatgttccatccccagatgatttggtgtctgatggactgcgttcctcc
aaaatgggtttgaaagccaattcaactgacttgaaaacttcaagagtttcctcaagcatc
aatgagaagaatggtgtccttagtaaatcaagtactgaaaggtcagatagctcatctgca
ttgatgccaaaaggcagacatttcagtagggacaagagcaatcatttggagaatgatatg
ggcaacacactctctagtgataaaagttctgtttgctcaccttcgttgaatctaaaaggc
agaaatgataaaattgatgagagcagtagttcttcgatgagtgggggcaacccacaaagc
cttaccaatagtttgaacaaaatggatgtaaatgttggatctggattgtcaaaaaatgtt
aataccagagtgactcgatcgaaggcagaatataaacctgaaaagtggatgctccctgac
caagctgaagatacattgactcaactgaatcttgcgatcgttggtcatgttgattctgga
aaatcaacactctctggtagattactacacctcttggggcgaatatcccaaaaagagatg
cacaaatatgagaaggaggctaagttacagggcaaggggtcctttgcttatgcttgggca
ttggatgagagcactgaagaaagggaaagaggaataactatgacagtggctgttgcttat
tttgattctaaaaagtatcatgttgttgtgcttgattcaccaggccataaggattttgta
ccaaatatgatatccggggcagctcaggctgatgctgcgattcttgttgtagatgcctca
gttggttcatttgaagccagtatggatggtggtaaggggcaaacacgggagcatgcacaa
cttatcagaagttttggtgttgatcaaattatagttgcagttaacaaaatggatgctgtg
gattactcaaatgaacggtttgactttattaaacagcaacttggaacatttctccgttct
tgtggttttagagattcttctatttcatggatcccattgagtgccatggagaatcaaaat
ttggtggctgtcccttctaatgtttgtttgctgtcctggtatcatggaccttatctgctg
gatgcagttgattccctccaacctcccacaagagatttctcaaagcctctacttatgccg
atatgtgatgttgttaaactttcttcactggggcaggtgtctgcctgtggtaaactagaa
gccggagctcttcgaagtggatccaaggttctagttatgccatcaggaaatgtgggctca
gtacgttccttagagcgtaactctcaggcttgtacctttgcaagagctggagacagtgtg
gctgttagtctgcaaggcattgatgggagccttgtgatggctgggggcgtgctatgtcac
cctgactttcctgttgctattgcaaaacatttggaactgaaagttcttgttttggatgtt
acaaccccgattttaattggttcccagttggaatttcatgtacaccatgctagggaagcc
gcaagagtggtcagaatactatctttacttgatccaaagactggcaaggtgacgaagaag
gcacctcgctgccttagtgcaaagcagactgcagtccttgaggtggctttacaagggcct
gtgtgcgtggaagagttttcaagctgtagagctcttggaagggtatttctaagagcatta
ggaagaacaattgctgtcggggttgtaacccgaataattgaggaaacctga
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