Juglans regia (English walnut): 109009696
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Entry
109009696 CDS
T05245
Name
(RefSeq) exosome complex exonuclease RRP46 homolog
KO
K12590
exosome complex component RRP46
Organism
jre
Juglans regia (English walnut)
Pathway
jre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109009696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
109009696
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109009696
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Ribonuc_red_2_N
Motif
Other DBs
NCBI-GeneID:
109009696
NCBI-ProteinID:
XP_018845827
UniProt:
A0A833XU77
A0A2I4GPK6
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All DBs
Position
2:complement(8392578..8399492)
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AA seq
243 aa
AA seq
DB search
MEIDRVDGRTENQLRPLACSRNILNRAHGSASWSQGDTKVLAAVYGPKAGVKKNENPEKA
CVEVIWKPKTGQIGKLEKEYEMIVKRTLQSICILTINPNTTTSVIVQVLNDDGSLLPCAI
NAACAALIDAGIPLKHLAVAICCCLADSGYVILDPTKLEEQKMKAFAYLVFPNLILSVLP
EGSLKVVGEPMEHAIITSVTQGAMSVDDYLHCLDRGRAATAKMSAFLRKTLQPQISSDSS
KAG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagatagagtggatggccgtacagaaaaccagttgagaccacttgcttgctcc
cgcaacatcctcaaccgcgctcatggttctgccagttggtctcaaggggacaccaaagtt
cttgctgcggtttatgggccaaaagcaggagtaaagaagaacgaaaaccctgagaaggcc
tgtgttgaagttatttggaaacccaagactgggcagattggaaaacttgaaaaggagtat
gagatgattgtgaagaggactttgcaaagcatttgtattttgactattaatccaaataca
acaacatcagtcatagttcaggttctcaacgatgatggttctcttctcccatgtgccatt
aatgctgcatgtgctgcccttattgacgctggaattcctctaaagcatcttgctgttgca
atatgttgttgtttggcagatagcggatatgttatactggaccccaccaagcttgaagaa
cagaaaatgaaagcatttgcttatttggttttcccaaacttgatcctctcagtcctccca
gaaggatcattaaaggtggtaggagaaccaatggaacatgcaattataacgtctgttacc
cagggtgcaatgtcagtggatgattatcttcactgtcttgaccgaggacgtgccgcaact
gctaagatgtctgcttttctcaggaagaccttgcaaccgcaaatctctagtgactcatcc
aaagctgggtga
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