Juglans regia (English walnut): 109010052
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Entry
109010052 CDS
T05245
Name
(RefSeq) spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jre04131
]
109010052
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
jre04812
]
109010052
Enzymes [BR:
jre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
109010052
Membrane trafficking [BR:
jre04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
109010052
Cytoskeleton proteins [BR:
jre04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
109010052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_22
AAA_5
Vps4_C
AAA_16
AAA_14
AAA_25
AAA_2
MIT
TIP49
DUF815
NPHP3_N
Mg_chelatase
nSTAND3
IstB_IS21
AAA_24
FliT
RNA_helicase
nSTAND_NTPase5
nSTAND6
DUF4142
Guanylate_kin
Motif
Other DBs
NCBI-GeneID:
109010052
NCBI-ProteinID:
XP_018846307
UniProt:
A0A2I4GQZ3
LinkDB
All DBs
Position
12:28674650..28681455
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AA seq
489 aa
AA seq
DB search
MSILKGLIDSLGSIFSSTYGSEPNSGPPNSSSAMDGVAGSSVSNERVAYKLKGYFDLAKE
EISKAVRAEEWGLVDDAIIHYKNAQRILVEASSTSAPSYISSSEQEKVKSYRQKISKWQG
QVSERLQALSRRAGGTSTSKSTLTHAQTAAVMPATRNARNDMLQKSSGSRIGKPVMRNQT
DKVVSPKTMQESNTGSEAKLVEMINTTIVDRSPSVKWEDVAGLEKAKQTLMEMVILPTKR
RDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVR
ALFMVAKSRQPSVIFIDEIDSILSARQANENDASRRLKSEFLIQFDGVTSNPNDAIIVIG
ATNKPQELDDAVLRRLVKRIYIPLPDENVRRLLLKNKLKGQAFSLPSGDLQRLARETERY
SGSDLQALCEEAAMMPIRELGANILTVKENQVRPLRYEDFQKAMTVIRPSLNKSKYEELE
QWNQEYGSN
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcctcaagggacttatcgactctcttggctcaatctttagctcaacctatggt
tctgaaccaaactccggccctcccaattcttcttccgccatggatggtgtagctggatcg
tcggtttcgaacgagcgcgtagcatacaagctcaaaggatacttcgacttggcaaaggaa
gagatctccaaggccgttagggccgaagagtggggcttagtcgacgacgccattattcac
tacaagaacgcccagcggatcctcgtcgaagctagttcgactagtgcgccttcttatatt
agctcgagtgaacaagagaaggtgaaatcctatcgtcaaaaaatatcaaaatggcagggt
caggtttcggaaaggttacaagctttgagtaggcgtgcaggtggcacatccacaagtaag
agcaccttaactcatgctcaaacagctgcagttatgccagcaacaagaaatgctagaaat
gatatgttacaaaagtccagtggctctagaattggcaaaccagtgatgagaaatcagaca
gataaagttgtaagcccaaaaactatgcaagaatctaacactggtagtgaagcaaaattg
gttgaaatgataaatactacaatagtggatagaagtccttctgttaaatgggaagatgtt
gctggccttgagaaggcaaagcaaactttaatggaaatggttatcttaccaacgaaaaga
agagacttattcactggtcttcggaggccagccagaggtttgcttctttttggtcccccg
gggaatgggaagaccatgcttgccaaagcagtcgcttcagagtctgaggcaacatttttt
aatgtatctgcttcttccttgacatcaaaatgggttggtgaagctgagaaacttgttcgg
gctctcttcatggtggctaaatccagacagccatctgtaattttcatcgatgaaattgat
agtatcctgtcggcaaggcaggctaatgagaatgatgcaagccgaaggttaaagtcggag
tttctaatacagtttgatggggtgacctctaatcctaatgacgccataattgtcattggt
gctactaacaagccacaagaactggatgatgccgttcttaggagattggtgaagagaata
tatatacctttaccagatgaaaatgtgaggagactacttcttaagaacaaactcaagggc
caggcattttccttacccagtggagatctacaaaggcttgcaagagagacagaaagatat
tctggaagtgatctacaagccttgtgtgaagaagctgcaatgatgccaatcagagagcta
ggtgcgaacattctaactgtcaaggaaaatcaggtaagaccgctgagatatgaagatttt
cagaaggcaatgactgtcattagaccaagcttaaacaaaagcaagtatgaagagcttgaa
caatggaaccaggagtatggatctaattga
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