KEGG   Juglans regia (English walnut): 109010134
Entry
109010134         CDS       T05245                                 
Name
(RefSeq) protein SEH1
  KO
K14299  nucleoporin SEH1
Organism
jre  Juglans regia (English walnut)
Pathway
jre03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109010134
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jre03019]
    109010134
   04131 Membrane trafficking [BR:jre04131]
    109010134
Messenger RNA biogenesis [BR:jre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     109010134
Membrane trafficking [BR:jre04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    109010134
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 ANAPC4_WD40 Beta-prop_IFT122_1st WD40_WDHD1_1st Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR5 Beta-prop_RIG_2nd Beta-prop_EML_2 EIF3I Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 109010134
NCBI-ProteinID: XP_018846398
UniProt: A0A2I4GR70 A0A833UFE0
LinkDB
Position
9:complement(19165768..19170899)
AA seq 326 aa
MAKSLVTLEKGTVCSAWNYCGQRLATGSGDGTLAVFDSQDPASSSSFTCTSKSRVHEDSI
VKVVWVPPEYGDAVACICTDGTVSLCEEVKEDAQPLQWKLCKSFKSNSAKVLDIQFGISL
RSLKMVAAYSDGHVKVYELLDCLELKNWQLQAEFQNVIESVFTFSKALCLSASISWNPQG
GESQESSFVLGFNSDTSQLNSSKVWEFDPAHQRWLPVAELALPGDKGDQVYAVAWAPNIG
RPYEVIAVATHKGISIWHLGLDPDLDGRLSVEKVALLSSHKGEVWQMEWDMSGMTLATTA
SDGVVRLWQSNLNGAWMEQAAFEPTS
NT seq 981 nt   +upstreamnt  +downstreamnt
atggcgaaatctttggtgacccttgagaaagggacggtctgctcggcatggaactactgc
ggccagagattggccactggttccggcgatggaaccctagctgtattcgactcgcaggac
ccagcttcttcttcttcctttacctgcacttccaaatctagggtacacgaggacagcatt
gtcaaggttgtttgggttcctccagaatatggcgatgcagtagcatgcatttgcactgat
ggaactgtgtcattgtgcgaggaggttaaagaagatgcgcaacctcttcaatggaagctg
tgcaaaagctttaaaagcaattcagctaaagtgttggatatccaatttggaatctctctg
agaagtctgaaaatggttgctgcatattcagatggccatgtgaaagtctatgagctcctg
gattgcttggagctgaagaattggcaacttcaggctgaatttcagaatgtgattgagtca
gtctttacattcagcaaggctttgtgcttatctgcatctatttcttggaatccacaagga
ggggaaagccaggaatcaagtttcgttttgggtttcaattcggatacatcacaacttaat
tcctccaaggtatgggaatttgacccggcccaccaaagatggcttccagttgctgagttg
gcgttgcctggggacaaaggtgatcaggtttatgctgttgcatgggcaccaaacattggc
agaccatatgaagtaatagccgttgcaactcacaagggaatttcaatatggcatcttgga
ttggaccctgacctagatggaaggctctcagtggaaaaagttgctctgctctccagtcat
aaaggcgaggtgtggcagatggaatgggacatgagtggaatgaccttggcaactaccgca
agtgatggggtggtacgattgtggcagtctaatttgaatggcgcttggatggaacaggct
gcattcgaacccacttcttag

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