Juglans regia (English walnut): 109010182
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Entry
109010182 CDS
T05245
Name
(RefSeq) uncharacterized protein LOC109010182
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jre03016
]
109010182
Enzymes [BR:
jre01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
109010182
Transfer RNA biogenesis [BR:
jre03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
109010182
Prokaryotic type
109010182
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
109010182
NCBI-ProteinID:
XP_018846476
UniProt:
A0A2I4GRF3
A0A833USD6
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Position
10:2438823..2445798
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AA seq
541 aa
AA seq
DB search
MGKSLTLIHVSFLLFRPRSMITSLTRVISLSLPKPIDNTLFSLSPSSLFFSTTSTQFPLQ
YDMIINRPTQSQPRHTPARVRKSNPDYSPEFDSPEKPVSEQGFEDWVDEKLLSESGTNRP
SSEKLEMDKSMRKYYSKRRKRMYGSDSDEDGKRHDEGFVELKPEVVEFNRLHEREEELYF
YDTFAYPWEKEKHYKMVYQLEKKYFPDHCLDKAFLEPGESNANNAKGKVKKKAGVKSGEK
NCEDHDEGGDGKKLVFFDEEGEQKGREELAKKDASKDVTEKKVEEFFKCLNKVPKKDGEV
VNEPYLVTRSMELPPRWDSPCGTVVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPM
ATGLLIVCVGKATKLVDRYQGMIKGYSGVFRLGEATSTWDADSAVIQREPWEHIKDEEIK
KTAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFRFDIERSLDDRQN
LIFRVTCSKGTYIRSLCADFGKALGSCAHLTALRRDSIGEYSADDAWDFKELEESITKSY
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggggaagtctctcactctaattcacgtatccttccttctcttccgtcccagatccatg
attacttccttgacgcgagtaatctctctctcattacccaaacctattgacaataccctc
ttttcgctatctccctcttcgctttttttctccaccacgtccacccaattccctcttcag
tacgatatgatcatcaaccgcccaactcagtcccaacctcgccacaccccagcccgcgta
cgcaagtcaaacccagactactcaccagagtttgattcaccagagaaacccgtttcggaa
cagggcttcgaggactgggtggatgaaaagctgttatcagagagcggaacaaaccgaccc
agttcggaaaaattggaaatggacaagtctatgaggaagtactacagtaagaggaggaag
aggatgtatgggtcggattcggatgaggatggtaagcggcacgatgaggggtttgtggaa
ctgaagcctgaggtggtggagtttaatagattgcatgagagagaggaggagttgtatttt
tacgatacgtttgcgtatccgtgggagaaggagaagcattacaagatggtgtatcagttg
gagaagaagtattttcctgatcattgcctcgacaaggcatttcttgaacccggcgaatcg
aatgcaaataatgcgaaggggaaggtaaaaaagaaagctggtgttaagagtggggagaag
aactgtgaggatcacgacgagggaggggatggtaagaagttggtgttctttgacgaagaa
ggagaacaaaagggtagggaggaattagcgaagaaggatgcgagtaaggatgttacggag
aagaaggtagaggagttctttaagtgtttgaataaagttcccaaaaaggatggtgaagtc
gtgaatgagccataccttgtgacaaggagtatggagcttccgccaagatgggatagtccg
tgcgggacggtggttttagtgaacaaacccaaaggatggacatcatttacagtttgtgga
aagctgcgtcgcctagtcaaagtgaaaaaggtagggcatgccggaacccttgatccaatg
gcaactggtttgttaattgtatgtgttggtaaagccacaaagttggtagacagatatcaa
ggtatgattaagggctatagtggggttttccgactaggggaggccacttcgacttgggat
gctgattcagcggtcattcagcgggagccttgggagcatatcaaagatgaggagataaag
aaaactgccgcctccttttgtggggaaatttggcaggttcccccgatgttctctgctatc
aaagttggaggagaaaagatgtatgagaaagcaagaaggggagagagcattgaactttca
cctagaaggatttcaatcttccggtttgatattgagcgtagcttagatgacaggcaaaat
ctgattttccgggtgacatgctccaaaggtacatacatacgttcactatgtgcagatttt
gggaaggctcttggcagttgtgctcatttaactgctcttcgaagggattcaattggtgaa
tattcagcagatgatgcatgggacttcaaagagctggaagagtcaattaccaaaagttat
ttctaa
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